Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.82■□□□□ 0.6
GDF1P27539 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.82■□□□□ 0.6
GDF1P27539 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.82■□□□□ 0.6
GDF1P27539 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GDF1P27539 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
GDF1P27539 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.82■□□□□ 0.6
GDF1P27539 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.82■□□□□ 0.6
GDF1P27539 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GDF1P27539 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GDF1P27539 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GDF1P27539 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GDF1P27539 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GDF1P27539 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDF1P27539 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.81■□□□□ 0.6
GDF1P27539 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
GDF1P27539 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.81■□□□□ 0.6
GDF1P27539 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.81■□□□□ 0.6
GDF1P27539 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.81■□□□□ 0.6
GDF1P27539 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.81■□□□□ 0.6
GDF1P27539 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GDF1P27539 FAM21FP-204ENST00000608637 956 ntBASIC18.81■□□□□ 0.6
GDF1P27539 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GDF1P27539 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDF1P27539 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDF1P27539 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDF1P27539 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GDF1P27539 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GDF1P27539 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDF1P27539 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
GDF1P27539 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.8■□□□□ 0.6
GDF1P27539 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDF1P27539 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDF1P27539 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.8■□□□□ 0.6
GDF1P27539 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
GDF1P27539 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDF1P27539 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GDF1P27539 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.8■□□□□ 0.6
GDF1P27539 MIPEPP3-201ENST00000412105 444 ntBASIC18.8■□□□□ 0.6
GDF1P27539 BX276092.2-201ENST00000417668 665 ntBASIC18.8■□□□□ 0.6
GDF1P27539 AC007322.3-201ENST00000426526 701 ntBASIC18.8■□□□□ 0.6
GDF1P27539 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.8■□□□□ 0.6
GDF1P27539 MIR4758-201ENST00000577688 71 ntBASIC18.8■□□□□ 0.6
GDF1P27539 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
GDF1P27539 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
GDF1P27539 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.8■□□□□ 0.6
GDF1P27539 AC010980.2-201ENST00000587099 1412 ntBASIC18.8■□□□□ 0.6
GDF1P27539 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
GDF1P27539 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
GDF1P27539 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.8■□□□□ 0.6
GDF1P27539 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.8■□□□□ 0.6
GDF1P27539 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.8■□□□□ 0.6
GDF1P27539 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDF1P27539 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDF1P27539 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.79■□□□□ 0.6
GDF1P27539 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDF1P27539 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDF1P27539 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDF1P27539 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDF1P27539 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDF1P27539 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.79■□□□□ 0.6
GDF1P27539 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDF1P27539 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
GDF1P27539 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDF1P27539 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GDF1P27539 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.79■□□□□ 0.6
GDF1P27539 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDF1P27539 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.78■□□□□ 0.6
GDF1P27539 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GDF1P27539 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
GDF1P27539 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDF1P27539 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDF1P27539 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDF1P27539 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GDF1P27539 AC069152.1-201ENST00000438030 544 ntBASIC18.78■□□□□ 0.6
GDF1P27539 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.78■□□□□ 0.6
GDF1P27539 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.78■□□□□ 0.6
GDF1P27539 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.78■□□□□ 0.6
GDF1P27539 AC133041.1-202ENST00000642053 222 ntBASIC18.78■□□□□ 0.6
GDF1P27539 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDF1P27539 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.78■□□□□ 0.6
GDF1P27539 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GDF1P27539 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
GDF1P27539 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
GDF1P27539 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GDF1P27539 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.77■□□□□ 0.6
GDF1P27539 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
GDF1P27539 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GDF1P27539 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
GDF1P27539 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GDF1P27539 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.77■□□□□ 0.6
GDF1P27539 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.77■□□□□ 0.6
GDF1P27539 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.77■□□□□ 0.6
GDF1P27539 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.77■□□□□ 0.6
GDF1P27539 AC098934.4-201ENST00000564127 592 ntBASIC18.77■□□□□ 0.6
GDF1P27539 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.77■□□□□ 0.6
GDF1P27539 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
GDF1P27539 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.77■□□□□ 0.6
GDF1P27539 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GDF1P27539 Z98882.1-201ENST00000622160 2253 ntBASIC18.77■□□□□ 0.6
GDF1P27539 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms