Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC007322.1-201ENST00000426983 750 ntBASIC20.26■□□□□ 0.83
CDH3P22223 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.26■□□□□ 0.83
CDH3P22223 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH3P22223 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH3P22223 AL391422.3-201ENST00000603791 2761 ntBASIC20.25■□□□□ 0.83
CDH3P22223 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CDH3P22223 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDH3P22223 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDH3P22223 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH3P22223 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH3P22223 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH3P22223 ID1-201ENST00000376105 1233 ntBASIC20.25■□□□□ 0.83
CDH3P22223 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDH3P22223 MIR663A-201ENST00000385250 93 ntBASIC20.25■□□□□ 0.83
CDH3P22223 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.25■□□□□ 0.83
CDH3P22223 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CDH3P22223 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.25■□□□□ 0.83
CDH3P22223 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CDH3P22223 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.25■□□□□ 0.83
CDH3P22223 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.25■□□□□ 0.83
CDH3P22223 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH3P22223 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH3P22223 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH3P22223 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDH3P22223 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH3P22223 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH3P22223 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.24■□□□□ 0.83
CDH3P22223 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH3P22223 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDH3P22223 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH3P22223 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDH3P22223 CROCCP5-201ENST00000436658 830 ntBASIC20.24■□□□□ 0.83
CDH3P22223 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.24■□□□□ 0.83
CDH3P22223 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH3P22223 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDH3P22223 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.24■□□□□ 0.83
CDH3P22223 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDH3P22223 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.24■□□□□ 0.83
CDH3P22223 AC061975.6-201ENST00000579045 1553 ntBASIC20.24■□□□□ 0.83
CDH3P22223 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDH3P22223 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH3P22223 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDH3P22223 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH3P22223 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH3P22223 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.24■□□□□ 0.83
CDH3P22223 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDH3P22223 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.24■□□□□ 0.83
CDH3P22223 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH3P22223 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH3P22223 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.23■□□□□ 0.83
CDH3P22223 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH3P22223 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.23■□□□□ 0.83
CDH3P22223 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH3P22223 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH3P22223 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDH3P22223 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.23■□□□□ 0.83
CDH3P22223 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDH3P22223 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CDH3P22223 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH3P22223 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDH3P22223 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDH3P22223 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH3P22223 KRT16P2-201ENST00000414673 1423 ntBASIC20.22■□□□□ 0.83
CDH3P22223 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.22■□□□□ 0.83
CDH3P22223 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.22■□□□□ 0.83
CDH3P22223 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.22■□□□□ 0.83
CDH3P22223 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH3P22223 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH3P22223 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH3P22223 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDH3P22223 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDH3P22223 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH3P22223 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH3P22223 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH3P22223 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH3P22223 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH3P22223 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH3P22223 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH3P22223 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH3P22223 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDH3P22223 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH3P22223 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH3P22223 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH3P22223 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDH3P22223 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.21■□□□□ 0.83
CDH3P22223 TERF1P5-201ENST00000477545 1207 ntBASIC20.21■□□□□ 0.83
CDH3P22223 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.21■□□□□ 0.83
CDH3P22223 AC005181.1-201ENST00000604782 1256 ntBASIC20.21■□□□□ 0.83
CDH3P22223 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CDH3P22223 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH3P22223 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH3P22223 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH3P22223 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH3P22223 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH3P22223 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH3P22223 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH3P22223 HLA-L-209ENST00000420110 1011 ntBASIC20.2■□□□□ 0.82
CDH3P22223 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.2■□□□□ 0.82
CDH3P22223 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH3P22223 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms