Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 PRKY-204ENST00000533551 1019 ntBASIC25.73■■□□□ 1.71
KCNA3P22001 AC105020.6-201ENST00000621523 1217 ntBASIC25.73■■□□□ 1.71
KCNA3P22001 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC25.73■■□□□ 1.71
KCNA3P22001 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
KCNA3P22001 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
KCNA3P22001 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
KCNA3P22001 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
KCNA3P22001 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
KCNA3P22001 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
KCNA3P22001 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC25.72■■□□□ 1.71
KCNA3P22001 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
KCNA3P22001 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
KCNA3P22001 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
KCNA3P22001 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
KCNA3P22001 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
KCNA3P22001 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
KCNA3P22001 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
KCNA3P22001 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
KCNA3P22001 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC25.72■■□□□ 1.71
KCNA3P22001 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
KCNA3P22001 RARRES2P10-201ENST00000564312 460 ntBASIC25.72■■□□□ 1.71
KCNA3P22001 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
KCNA3P22001 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.72■■□□□ 1.71
KCNA3P22001 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
KCNA3P22001 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
KCNA3P22001 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
KCNA3P22001 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
KCNA3P22001 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
KCNA3P22001 AC007322.3-201ENST00000426526 701 ntBASIC25.71■■□□□ 1.71
KCNA3P22001 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
KCNA3P22001 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
KCNA3P22001 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC25.71■■□□□ 1.71
KCNA3P22001 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
KCNA3P22001 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
KCNA3P22001 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
KCNA3P22001 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
KCNA3P22001 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
KCNA3P22001 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
KCNA3P22001 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC25.7■■□□□ 1.71
KCNA3P22001 KRASP1-201ENST00000407852 552 ntBASIC25.7■■□□□ 1.7
KCNA3P22001 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC25.7■■□□□ 1.7
KCNA3P22001 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC25.7■■□□□ 1.7
KCNA3P22001 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC25.7■■□□□ 1.7
KCNA3P22001 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
KCNA3P22001 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
KCNA3P22001 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
KCNA3P22001 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
KCNA3P22001 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
KCNA3P22001 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
KCNA3P22001 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
KCNA3P22001 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.7■■□□□ 1.7
KCNA3P22001 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
KCNA3P22001 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
KCNA3P22001 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
KCNA3P22001 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
KCNA3P22001 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
KCNA3P22001 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC25.69■■□□□ 1.7
KCNA3P22001 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
KCNA3P22001 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
KCNA3P22001 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC25.69■■□□□ 1.7
KCNA3P22001 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC25.69■■□□□ 1.7
KCNA3P22001 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
KCNA3P22001 C11orf96-202ENST00000528572 1834 ntBASIC25.69■■□□□ 1.7
KCNA3P22001 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC25.68■■□□□ 1.7
KCNA3P22001 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
KCNA3P22001 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
KCNA3P22001 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
KCNA3P22001 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC25.68■■□□□ 1.7
KCNA3P22001 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
KCNA3P22001 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
KCNA3P22001 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KCNA3P22001 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
KCNA3P22001 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC25.67■■□□□ 1.7
KCNA3P22001 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC25.67■■□□□ 1.7
KCNA3P22001 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
KCNA3P22001 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC25.67■■□□□ 1.7
KCNA3P22001 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.67■■□□□ 1.7
KCNA3P22001 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.66■■□□□ 1.7
KCNA3P22001 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
KCNA3P22001 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
KCNA3P22001 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
KCNA3P22001 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
KCNA3P22001 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC25.66■■□□□ 1.7
KCNA3P22001 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC25.66■■□□□ 1.7
KCNA3P22001 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC25.66■■□□□ 1.7
KCNA3P22001 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
KCNA3P22001 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
KCNA3P22001 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC25.66■■□□□ 1.7
KCNA3P22001 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
KCNA3P22001 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
KCNA3P22001 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
KCNA3P22001 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
KCNA3P22001 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
KCNA3P22001 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
KCNA3P22001 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC25.65■■□□□ 1.7
KCNA3P22001 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
KCNA3P22001 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
KCNA3P22001 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
KCNA3P22001 PTPA-214ENST00000423100 988 ntTSL 2 BASIC25.65■■□□□ 1.7
KCNA3P22001 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms