Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
HNRNPCL4P0DMR1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HNRNPCL4P0DMR1 AC027612.3-201ENST00000413684 1047 ntBASIC19.24■□□□□ 0.67
HNRNPCL4P0DMR1 AC105265.2-201ENST00000467189 838 ntBASIC19.24■□□□□ 0.67
HNRNPCL4P0DMR1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.24■□□□□ 0.67
HNRNPCL4P0DMR1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HNRNPCL4P0DMR1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HNRNPCL4P0DMR1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.24■□□□□ 0.67
HNRNPCL4P0DMR1 GABARAPL3-202ENST00000624044 1851 ntBASIC19.24■□□□□ 0.67
HNRNPCL4P0DMR1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HNRNPCL4P0DMR1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HNRNPCL4P0DMR1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HNRNPCL4P0DMR1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HNRNPCL4P0DMR1 AC073130.3-201ENST00000624389 2278 ntBASIC19.23■□□□□ 0.67
HNRNPCL4P0DMR1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.23■□□□□ 0.67
HNRNPCL4P0DMR1 AC011484.1-201ENST00000377652 1995 ntBASIC19.23■□□□□ 0.67
HNRNPCL4P0DMR1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HNRNPCL4P0DMR1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HNRNPCL4P0DMR1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HNRNPCL4P0DMR1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HNRNPCL4P0DMR1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.23■□□□□ 0.67
HNRNPCL4P0DMR1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.23■□□□□ 0.67
HNRNPCL4P0DMR1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.23■□□□□ 0.67
HNRNPCL4P0DMR1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HNRNPCL4P0DMR1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HNRNPCL4P0DMR1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HNRNPCL4P0DMR1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HNRNPCL4P0DMR1 AC007225.1-201ENST00000566331 1836 ntBASIC19.23■□□□□ 0.67
HNRNPCL4P0DMR1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HNRNPCL4P0DMR1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 AC138907.5-202ENST00000569484 235 ntBASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HNRNPCL4P0DMR1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.21■□□□□ 0.67
HNRNPCL4P0DMR1 SLC25A24-204ENST00000569674 2357 ntBASIC19.21■□□□□ 0.67
HNRNPCL4P0DMR1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
HNRNPCL4P0DMR1 AP005212.1-201ENST00000581547 1997 ntBASIC19.21■□□□□ 0.67
HNRNPCL4P0DMR1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HNRNPCL4P0DMR1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HNRNPCL4P0DMR1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HNRNPCL4P0DMR1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HNRNPCL4P0DMR1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.21■□□□□ 0.67
HNRNPCL4P0DMR1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HNRNPCL4P0DMR1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
HNRNPCL4P0DMR1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HNRNPCL4P0DMR1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HNRNPCL4P0DMR1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
HNRNPCL4P0DMR1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HNRNPCL4P0DMR1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HNRNPCL4P0DMR1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HNRNPCL4P0DMR1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HNRNPCL4P0DMR1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HNRNPCL4P0DMR1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HNRNPCL4P0DMR1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HNRNPCL4P0DMR1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HNRNPCL4P0DMR1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HNRNPCL4P0DMR1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HNRNPCL4P0DMR1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.2■□□□□ 0.66
HNRNPCL4P0DMR1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.2■□□□□ 0.66
HNRNPCL4P0DMR1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.2■□□□□ 0.66
HNRNPCL4P0DMR1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.2■□□□□ 0.66
HNRNPCL4P0DMR1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.2■□□□□ 0.66
HNRNPCL4P0DMR1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HNRNPCL4P0DMR1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HNRNPCL4P0DMR1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HNRNPCL4P0DMR1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HNRNPCL4P0DMR1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.2■□□□□ 0.66
HNRNPCL4P0DMR1 LINC02228-203ENST00000641970 1355 ntBASIC19.19■□□□□ 0.66
HNRNPCL4P0DMR1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HNRNPCL4P0DMR1 KRT16P2-201ENST00000414673 1423 ntBASIC19.19■□□□□ 0.66
HNRNPCL4P0DMR1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HNRNPCL4P0DMR1 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.19■□□□□ 0.66
HNRNPCL4P0DMR1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.19■□□□□ 0.66
HNRNPCL4P0DMR1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.19■□□□□ 0.66
HNRNPCL4P0DMR1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.19■□□□□ 0.66
HNRNPCL4P0DMR1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.19■□□□□ 0.66
HNRNPCL4P0DMR1 AC120498.10-201ENST00000621827 505 ntBASIC19.19■□□□□ 0.66
HNRNPCL4P0DMR1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms