Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HMGCRP04035 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
HMGCRP04035 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.52■■□□□ 1.36
HMGCRP04035 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HMGCRP04035 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
HMGCRP04035 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.52■■□□□ 1.36
HMGCRP04035 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
HMGCRP04035 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.52■■□□□ 1.36
HMGCRP04035 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
HMGCRP04035 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
HMGCRP04035 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
HMGCRP04035 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.52■■□□□ 1.36
HMGCRP04035 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.52■■□□□ 1.36
HMGCRP04035 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.52■■□□□ 1.36
HMGCRP04035 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.52■■□□□ 1.36
HMGCRP04035 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.52■■□□□ 1.36
HMGCRP04035 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HMGCRP04035 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
HMGCRP04035 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
HMGCRP04035 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.51■■□□□ 1.35
HMGCRP04035 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HMGCRP04035 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HMGCRP04035 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.51■■□□□ 1.35
HMGCRP04035 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HMGCRP04035 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HMGCRP04035 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HMGCRP04035 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HMGCRP04035 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HMGCRP04035 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HMGCRP04035 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.5■■□□□ 1.35
HMGCRP04035 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HMGCRP04035 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.5■■□□□ 1.35
HMGCRP04035 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HMGCRP04035 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HMGCRP04035 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
HMGCRP04035 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
HMGCRP04035 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
HMGCRP04035 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
HMGCRP04035 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC23.5■■□□□ 1.35
HMGCRP04035 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
HMGCRP04035 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
HMGCRP04035 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
HMGCRP04035 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.5■■□□□ 1.35
HMGCRP04035 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.5■■□□□ 1.35
HMGCRP04035 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HMGCRP04035 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.49■■□□□ 1.35
HMGCRP04035 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
HMGCRP04035 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
HMGCRP04035 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
HMGCRP04035 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HMGCRP04035 AC007322.3-201ENST00000426526 701 ntBASIC23.49■■□□□ 1.35
HMGCRP04035 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.49■■□□□ 1.35
HMGCRP04035 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
HMGCRP04035 AP001412.1-201ENST00000608405 714 ntBASIC23.49■■□□□ 1.35
HMGCRP04035 AL049637.2-201ENST00000641778 930 ntBASIC23.49■■□□□ 1.35
HMGCRP04035 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HMGCRP04035 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
HMGCRP04035 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HMGCRP04035 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HMGCRP04035 C9orf163-202ENST00000624034 2573 ntBASIC23.48■■□□□ 1.35
HMGCRP04035 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HMGCRP04035 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.48■■□□□ 1.35
HMGCRP04035 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HMGCRP04035 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
HMGCRP04035 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HMGCRP04035 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.48■■□□□ 1.35
HMGCRP04035 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.48■■□□□ 1.35
HMGCRP04035 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
HMGCRP04035 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
HMGCRP04035 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.48■■□□□ 1.35
HMGCRP04035 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HMGCRP04035 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.48■■□□□ 1.35
HMGCRP04035 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
HMGCRP04035 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.48■■□□□ 1.35
HMGCRP04035 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.48■■□□□ 1.35
HMGCRP04035 MTDHP1-201ENST00000605323 784 ntBASIC23.48■■□□□ 1.35
HMGCRP04035 AC133561.5-201ENST00000635547 218 ntBASIC23.48■■□□□ 1.35
HMGCRP04035 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
HMGCRP04035 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
HMGCRP04035 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
HMGCRP04035 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HMGCRP04035 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HMGCRP04035 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
HMGCRP04035 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
HMGCRP04035 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.48■■□□□ 1.35
HMGCRP04035 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
HMGCRP04035 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
HMGCRP04035 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
HMGCRP04035 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
HMGCRP04035 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.47■■□□□ 1.35
HMGCRP04035 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
HMGCRP04035 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.47■■□□□ 1.35
HMGCRP04035 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
HMGCRP04035 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
HMGCRP04035 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
HMGCRP04035 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
HMGCRP04035 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
HMGCRP04035 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC23.47■■□□□ 1.35
HMGCRP04035 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
HMGCRP04035 AC105020.6-201ENST00000621523 1217 ntBASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms