Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TOMM40O96008 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.19■□□□□ 0.18
TOMM40O96008 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TOMM40O96008 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.19■□□□□ 0.18
TOMM40O96008 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TOMM40O96008 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TOMM40O96008 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TOMM40O96008 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TOMM40O96008 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TOMM40O96008 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.19■□□□□ 0.18
TOMM40O96008 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.19■□□□□ 0.18
TOMM40O96008 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TOMM40O96008 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TOMM40O96008 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.19■□□□□ 0.18
TOMM40O96008 MIR939-201ENST00000401314 82 ntBASIC16.19■□□□□ 0.18
TOMM40O96008 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.19■□□□□ 0.18
TOMM40O96008 AC091305.1-201ENST00000479476 895 ntBASIC16.19■□□□□ 0.18
TOMM40O96008 AF213884.3-201ENST00000563833 479 ntBASIC16.19■□□□□ 0.18
TOMM40O96008 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.19■□□□□ 0.18
TOMM40O96008 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
TOMM40O96008 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
TOMM40O96008 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TOMM40O96008 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TOMM40O96008 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TOMM40O96008 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.19■□□□□ 0.18
TOMM40O96008 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TOMM40O96008 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TOMM40O96008 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TOMM40O96008 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TOMM40O96008 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TOMM40O96008 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.18■□□□□ 0.18
TOMM40O96008 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TOMM40O96008 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TOMM40O96008 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.18■□□□□ 0.18
TOMM40O96008 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TOMM40O96008 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TOMM40O96008 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TOMM40O96008 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TOMM40O96008 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.18■□□□□ 0.18
TOMM40O96008 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.18■□□□□ 0.18
TOMM40O96008 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.18■□□□□ 0.18
TOMM40O96008 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TOMM40O96008 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TOMM40O96008 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TOMM40O96008 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.18■□□□□ 0.18
TOMM40O96008 FEM1AP1-201ENST00000431297 1995 ntBASIC16.18■□□□□ 0.18
TOMM40O96008 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TOMM40O96008 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.18■□□□□ 0.18
TOMM40O96008 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TOMM40O96008 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TOMM40O96008 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.18■□□□□ 0.18
TOMM40O96008 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TOMM40O96008 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TOMM40O96008 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TOMM40O96008 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.17■□□□□ 0.18
TOMM40O96008 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TOMM40O96008 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.17■□□□□ 0.18
TOMM40O96008 AC121338.2-201ENST00000622535 1744 ntBASIC16.17■□□□□ 0.18
TOMM40O96008 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TOMM40O96008 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TOMM40O96008 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TOMM40O96008 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TOMM40O96008 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.17■□□□□ 0.18
TOMM40O96008 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.17■□□□□ 0.18
TOMM40O96008 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.17■□□□□ 0.18
TOMM40O96008 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.17■□□□□ 0.18
TOMM40O96008 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TOMM40O96008 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.17■□□□□ 0.18
TOMM40O96008 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TOMM40O96008 PLK5-205ENST00000642079 1969 ntBASIC16.17■□□□□ 0.18
TOMM40O96008 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TOMM40O96008 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TOMM40O96008 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TOMM40O96008 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
TOMM40O96008 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.16■□□□□ 0.18
TOMM40O96008 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TOMM40O96008 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TOMM40O96008 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TOMM40O96008 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.16■□□□□ 0.18
TOMM40O96008 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.16■□□□□ 0.18
TOMM40O96008 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.16■□□□□ 0.18
TOMM40O96008 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.16■□□□□ 0.18
TOMM40O96008 AC110285.6-201ENST00000617652 491 ntBASIC16.16■□□□□ 0.18
TOMM40O96008 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TOMM40O96008 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.16■□□□□ 0.18
TOMM40O96008 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.16■□□□□ 0.18
TOMM40O96008 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TOMM40O96008 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.16■□□□□ 0.18
TOMM40O96008 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TOMM40O96008 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TOMM40O96008 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.15■□□□□ 0.18
TOMM40O96008 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TOMM40O96008 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TOMM40O96008 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TOMM40O96008 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.15■□□□□ 0.18
TOMM40O96008 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TOMM40O96008 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TOMM40O96008 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.15■□□□□ 0.18
TOMM40O96008 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TOMM40O96008 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms