Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
BEST1O76090 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
BEST1O76090 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.86■■□□□ 1.09
BEST1O76090 RARRES2P4-201ENST00000514074 484 ntBASIC21.86■■□□□ 1.09
BEST1O76090 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
BEST1O76090 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.86■■□□□ 1.09
BEST1O76090 OR10C1-204ENST00000622521 1039 ntBASIC21.86■■□□□ 1.09
BEST1O76090 AC007375.3-201ENST00000600936 2314 ntBASIC21.86■■□□□ 1.09
BEST1O76090 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
BEST1O76090 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
BEST1O76090 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BEST1O76090 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.85■■□□□ 1.09
BEST1O76090 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BEST1O76090 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BEST1O76090 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
BEST1O76090 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.85■■□□□ 1.09
BEST1O76090 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
BEST1O76090 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.85■■□□□ 1.09
BEST1O76090 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.85■■□□□ 1.09
BEST1O76090 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BEST1O76090 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BEST1O76090 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BEST1O76090 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BEST1O76090 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
BEST1O76090 AL049796.1-201ENST00000565336 1766 ntBASIC21.84■■□□□ 1.09
BEST1O76090 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
BEST1O76090 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
BEST1O76090 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
BEST1O76090 AC069236.1-201ENST00000604339 616 ntBASIC21.84■■□□□ 1.09
BEST1O76090 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
BEST1O76090 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
BEST1O76090 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
BEST1O76090 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
BEST1O76090 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
BEST1O76090 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.83■■□□□ 1.09
BEST1O76090 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
BEST1O76090 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.83■■□□□ 1.09
BEST1O76090 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
BEST1O76090 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
BEST1O76090 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
BEST1O76090 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
BEST1O76090 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.83■■□□□ 1.09
BEST1O76090 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.83■■□□□ 1.08
BEST1O76090 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
BEST1O76090 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.82■■□□□ 1.08
BEST1O76090 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
BEST1O76090 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
BEST1O76090 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
BEST1O76090 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
BEST1O76090 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
BEST1O76090 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.82■■□□□ 1.08
BEST1O76090 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.82■■□□□ 1.08
BEST1O76090 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.82■■□□□ 1.08
BEST1O76090 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
BEST1O76090 AL138781.1-201ENST00000566567 1274 ntBASIC21.82■■□□□ 1.08
BEST1O76090 FAM21FP-204ENST00000608637 956 ntBASIC21.82■■□□□ 1.08
BEST1O76090 AC008694.1-202ENST00000636953 945 ntBASIC21.82■■□□□ 1.08
BEST1O76090 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
BEST1O76090 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
BEST1O76090 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
BEST1O76090 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
BEST1O76090 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
BEST1O76090 AC116050.2-201ENST00000612102 1779 ntBASIC21.82■■□□□ 1.08
BEST1O76090 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
BEST1O76090 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
BEST1O76090 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
BEST1O76090 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
BEST1O76090 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
BEST1O76090 AL355802.2-201ENST00000402069 882 ntBASIC21.81■■□□□ 1.08
BEST1O76090 AL512625.2-201ENST00000417533 625 ntBASIC21.81■■□□□ 1.08
BEST1O76090 AC007322.3-201ENST00000426526 701 ntBASIC21.81■■□□□ 1.08
BEST1O76090 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BEST1O76090 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BEST1O76090 CDV3P1-201ENST00000471403 739 ntBASIC21.81■■□□□ 1.08
BEST1O76090 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.81■■□□□ 1.08
BEST1O76090 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.81■■□□□ 1.08
BEST1O76090 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
BEST1O76090 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.81■■□□□ 1.08
BEST1O76090 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BEST1O76090 AC005229.4-201ENST00000610085 2198 ntBASIC21.81■■□□□ 1.08
BEST1O76090 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.8■■□□□ 1.08
BEST1O76090 AC010980.2-201ENST00000587099 1412 ntBASIC21.8■■□□□ 1.08
BEST1O76090 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
BEST1O76090 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BEST1O76090 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BEST1O76090 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BEST1O76090 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
BEST1O76090 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
BEST1O76090 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BEST1O76090 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.8■■□□□ 1.08
BEST1O76090 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.8■■□□□ 1.08
BEST1O76090 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.8■■□□□ 1.08
BEST1O76090 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.8■■□□□ 1.08
BEST1O76090 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BEST1O76090 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.8■■□□□ 1.08
BEST1O76090 MKRN4P-201ENST00000444706 1521 ntBASIC21.8■■□□□ 1.08
BEST1O76090 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
BEST1O76090 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.8■■□□□ 1.08
BEST1O76090 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.79■■□□□ 1.08
BEST1O76090 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms