Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
NDUFS3O75489 AC245052.3-201ENST00000450182 901 ntBASIC20.64■□□□□ 0.89
NDUFS3O75489 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.64■□□□□ 0.89
NDUFS3O75489 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
NDUFS3O75489 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.64■□□□□ 0.89
NDUFS3O75489 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
NDUFS3O75489 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NDUFS3O75489 PLK5-205ENST00000642079 1969 ntBASIC20.63■□□□□ 0.89
NDUFS3O75489 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFS3O75489 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.63■□□□□ 0.89
NDUFS3O75489 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFS3O75489 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFS3O75489 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFS3O75489 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFS3O75489 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFS3O75489 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
NDUFS3O75489 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.63■□□□□ 0.89
NDUFS3O75489 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.63■□□□□ 0.89
NDUFS3O75489 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.63■□□□□ 0.89
NDUFS3O75489 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.63■□□□□ 0.89
NDUFS3O75489 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFS3O75489 NTF6G-201ENST00000591094 616 ntBASIC20.63■□□□□ 0.89
NDUFS3O75489 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFS3O75489 AC087623.3-201ENST00000607047 1098 ntBASIC20.63■□□□□ 0.89
NDUFS3O75489 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.63■□□□□ 0.89
NDUFS3O75489 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFS3O75489 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NDUFS3O75489 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS3O75489 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS3O75489 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS3O75489 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS3O75489 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS3O75489 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS3O75489 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NDUFS3O75489 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.62■□□□□ 0.89
NDUFS3O75489 AC006128.1-201ENST00000624704 1661 ntBASIC20.62■□□□□ 0.89
NDUFS3O75489 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS3O75489 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS3O75489 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.62■□□□□ 0.89
NDUFS3O75489 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NDUFS3O75489 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NDUFS3O75489 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.62■□□□□ 0.89
NDUFS3O75489 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NDUFS3O75489 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS3O75489 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.62■□□□□ 0.89
NDUFS3O75489 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NDUFS3O75489 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.62■□□□□ 0.89
NDUFS3O75489 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.61■□□□□ 0.89
NDUFS3O75489 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFS3O75489 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFS3O75489 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NDUFS3O75489 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFS3O75489 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFS3O75489 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.61■□□□□ 0.89
NDUFS3O75489 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.61■□□□□ 0.89
NDUFS3O75489 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.61■□□□□ 0.89
NDUFS3O75489 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.61■□□□□ 0.89
NDUFS3O75489 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFS3O75489 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.61■□□□□ 0.89
NDUFS3O75489 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFS3O75489 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFS3O75489 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFS3O75489 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFS3O75489 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.61■□□□□ 0.89
NDUFS3O75489 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFS3O75489 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.61■□□□□ 0.89
NDUFS3O75489 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.61■□□□□ 0.89
NDUFS3O75489 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.61■□□□□ 0.89
NDUFS3O75489 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NDUFS3O75489 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.6■□□□□ 0.89
NDUFS3O75489 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFS3O75489 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFS3O75489 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFS3O75489 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.6■□□□□ 0.89
NDUFS3O75489 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFS3O75489 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.6■□□□□ 0.89
NDUFS3O75489 RARRES2P11-201ENST00000635158 484 ntBASIC20.6■□□□□ 0.89
NDUFS3O75489 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NDUFS3O75489 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFS3O75489 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFS3O75489 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFS3O75489 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
NDUFS3O75489 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFS3O75489 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NDUFS3O75489 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NDUFS3O75489 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDUFS3O75489 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDUFS3O75489 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.59■□□□□ 0.89
NDUFS3O75489 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDUFS3O75489 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDUFS3O75489 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
NDUFS3O75489 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NDUFS3O75489 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
NDUFS3O75489 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
NDUFS3O75489 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.59■□□□□ 0.89
NDUFS3O75489 KRT18P61-201ENST00000585825 1298 ntBASIC20.59■□□□□ 0.89
NDUFS3O75489 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
NDUFS3O75489 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
NDUFS3O75489 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NDUFS3O75489 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms