Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.86■□□□□ 0.77
CPNE3O75131 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.86■□□□□ 0.77
CPNE3O75131 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE3O75131 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CPNE3O75131 MIPEPP3-201ENST00000412105 444 ntBASIC19.86■□□□□ 0.77
CPNE3O75131 AC093787.1-201ENST00000450396 207 ntBASIC19.86■□□□□ 0.77
CPNE3O75131 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CPNE3O75131 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.86■□□□□ 0.77
CPNE3O75131 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CPNE3O75131 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CPNE3O75131 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.86■□□□□ 0.77
CPNE3O75131 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE3O75131 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
CPNE3O75131 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE3O75131 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CPNE3O75131 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE3O75131 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.85■□□□□ 0.77
CPNE3O75131 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE3O75131 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE3O75131 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE3O75131 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE3O75131 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.85■□□□□ 0.77
CPNE3O75131 AL137060.1-201ENST00000618151 2648 ntBASIC19.85■□□□□ 0.77
CPNE3O75131 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.85■□□□□ 0.77
CPNE3O75131 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.85■□□□□ 0.77
CPNE3O75131 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.85■□□□□ 0.77
CPNE3O75131 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.85■□□□□ 0.77
CPNE3O75131 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CPNE3O75131 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.85■□□□□ 0.77
CPNE3O75131 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.85■□□□□ 0.77
CPNE3O75131 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE3O75131 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE3O75131 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CPNE3O75131 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
CPNE3O75131 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CPNE3O75131 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.85■□□□□ 0.77
CPNE3O75131 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE3O75131 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CPNE3O75131 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.84■□□□□ 0.77
CPNE3O75131 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE3O75131 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE3O75131 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CPNE3O75131 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE3O75131 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.84■□□□□ 0.77
CPNE3O75131 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.84■□□□□ 0.77
CPNE3O75131 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.84■□□□□ 0.77
CPNE3O75131 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.84■□□□□ 0.77
CPNE3O75131 AC098934.4-201ENST00000564127 592 ntBASIC19.84■□□□□ 0.77
CPNE3O75131 FAM99A-202ENST00000538190 1989 ntBASIC19.84■□□□□ 0.77
CPNE3O75131 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CPNE3O75131 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE3O75131 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE3O75131 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CPNE3O75131 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE3O75131 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
CPNE3O75131 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE3O75131 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE3O75131 AC026471.6-201ENST00000622954 1905 ntBASIC19.83■□□□□ 0.77
CPNE3O75131 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE3O75131 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.83■□□□□ 0.77
CPNE3O75131 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CPNE3O75131 AC245052.3-201ENST00000450182 901 ntBASIC19.83■□□□□ 0.77
CPNE3O75131 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.83■□□□□ 0.77
CPNE3O75131 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.83■□□□□ 0.77
CPNE3O75131 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.83■□□□□ 0.77
CPNE3O75131 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.83■□□□□ 0.77
CPNE3O75131 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.83■□□□□ 0.77
CPNE3O75131 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPNE3O75131 AC242852.2-201ENST00000615738 1807 ntBASIC19.83■□□□□ 0.76
CPNE3O75131 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CPNE3O75131 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CPNE3O75131 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.83■□□□□ 0.76
CPNE3O75131 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE3O75131 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.82■□□□□ 0.76
CPNE3O75131 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
CPNE3O75131 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CPNE3O75131 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.82■□□□□ 0.76
CPNE3O75131 AC092118.2-201ENST00000613495 667 ntBASIC19.82■□□□□ 0.76
CPNE3O75131 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE3O75131 AC010542.4-201ENST00000563151 1910 ntBASIC19.82■□□□□ 0.76
CPNE3O75131 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPNE3O75131 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CPNE3O75131 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE3O75131 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CPNE3O75131 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE3O75131 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE3O75131 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE3O75131 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CPNE3O75131 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE3O75131 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE3O75131 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE3O75131 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CPNE3O75131 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CPNE3O75131 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.81■□□□□ 0.76
CPNE3O75131 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE3O75131 RARRES2P4-201ENST00000514074 484 ntBASIC19.81■□□□□ 0.76
CPNE3O75131 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.81■□□□□ 0.76
CPNE3O75131 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPNE3O75131 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.81■□□□□ 0.76
CPNE3O75131 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms