Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.39■□□□□ 0.85
TRIM13O60858 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.39■□□□□ 0.85
TRIM13O60858 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.39■□□□□ 0.85
TRIM13O60858 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM13O60858 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.39■□□□□ 0.85
TRIM13O60858 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TRIM13O60858 FP700111.2-201ENST00000619190 1892 ntBASIC20.39■□□□□ 0.85
TRIM13O60858 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM13O60858 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM13O60858 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM13O60858 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM13O60858 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM13O60858 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM13O60858 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM13O60858 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM13O60858 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM13O60858 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.38■□□□□ 0.85
TRIM13O60858 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.38■□□□□ 0.85
TRIM13O60858 AC024257.2-201ENST00000549699 147 ntBASIC20.38■□□□□ 0.85
TRIM13O60858 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM13O60858 AC105233.4-201ENST00000642045 216 ntBASIC20.38■□□□□ 0.85
TRIM13O60858 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM13O60858 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM13O60858 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM13O60858 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM13O60858 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM13O60858 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM13O60858 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM13O60858 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM13O60858 PCDHAC2-203ENST00000615316 3011 ntBASIC20.37■□□□□ 0.85
TRIM13O60858 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM13O60858 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM13O60858 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM13O60858 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM13O60858 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TRIM13O60858 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM13O60858 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM13O60858 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM13O60858 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM13O60858 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM13O60858 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM13O60858 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM13O60858 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM13O60858 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRIM13O60858 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM13O60858 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM13O60858 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM13O60858 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.36■□□□□ 0.85
TRIM13O60858 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM13O60858 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM13O60858 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM13O60858 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM13O60858 AL136162.1-201ENST00000607711 1078 ntBASIC20.36■□□□□ 0.85
TRIM13O60858 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM13O60858 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TRIM13O60858 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM13O60858 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM13O60858 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM13O60858 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.36■□□□□ 0.85
TRIM13O60858 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM13O60858 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRIM13O60858 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM13O60858 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM13O60858 AL162377.1-201ENST00000618844 1793 ntBASIC20.36■□□□□ 0.85
TRIM13O60858 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.36■□□□□ 0.85
TRIM13O60858 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM13O60858 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM13O60858 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TRIM13O60858 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.35■□□□□ 0.85
TRIM13O60858 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TRIM13O60858 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM13O60858 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM13O60858 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM13O60858 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM13O60858 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM13O60858 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM13O60858 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.35■□□□□ 0.85
TRIM13O60858 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM13O60858 AC011484.1-201ENST00000377652 1995 ntBASIC20.35■□□□□ 0.85
TRIM13O60858 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.35■□□□□ 0.85
TRIM13O60858 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM13O60858 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM13O60858 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM13O60858 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM13O60858 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM13O60858 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRIM13O60858 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM13O60858 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM13O60858 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.34■□□□□ 0.85
TRIM13O60858 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.34■□□□□ 0.85
TRIM13O60858 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM13O60858 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM13O60858 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM13O60858 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.34■□□□□ 0.85
TRIM13O60858 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.34■□□□□ 0.85
TRIM13O60858 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TRIM13O60858 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM13O60858 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TRIM13O60858 AL512408.1-201ENST00000569378 2000 ntBASIC20.34■□□□□ 0.85
TRIM13O60858 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms