Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.48■□□□□ 0.55
TRAF3IP2O43734 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 RBM17P2-201ENST00000616397 1405 ntBASIC18.48■□□□□ 0.55
TRAF3IP2O43734 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAF3IP2O43734 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP2O43734 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP2O43734 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP2O43734 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP2O43734 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP2O43734 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP2O43734 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP2O43734 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAF3IP2O43734 AC137761.2-201ENST00000561729 223 ntBASIC18.47■□□□□ 0.55
TRAF3IP2O43734 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAF3IP2O43734 AC145350.3-201ENST00000569033 163 ntBASIC18.47■□□□□ 0.55
TRAF3IP2O43734 AC243732.1-201ENST00000612648 864 ntBASIC18.47■□□□□ 0.55
TRAF3IP2O43734 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAF3IP2O43734 PLK5-205ENST00000642079 1969 ntBASIC18.47■□□□□ 0.55
TRAF3IP2O43734 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP2O43734 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TRAF3IP2O43734 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP2O43734 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP2O43734 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAF3IP2O43734 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAF3IP2O43734 AC121338.2-201ENST00000622535 1744 ntBASIC18.46■□□□□ 0.55
TRAF3IP2O43734 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRAF3IP2O43734 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TRAF3IP2O43734 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAF3IP2O43734 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAF3IP2O43734 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAF3IP2O43734 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAF3IP2O43734 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAF3IP2O43734 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAF3IP2O43734 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAF3IP2O43734 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAF3IP2O43734 KRT18P11-201ENST00000435214 1283 ntBASIC18.45■□□□□ 0.54
TRAF3IP2O43734 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.45■□□□□ 0.54
TRAF3IP2O43734 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.45■□□□□ 0.54
TRAF3IP2O43734 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRAF3IP2O43734 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRAF3IP2O43734 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
TRAF3IP2O43734 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAF3IP2O43734 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAF3IP2O43734 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 AC006128.1-201ENST00000624704 1661 ntBASIC18.44■□□□□ 0.54
TRAF3IP2O43734 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRAF3IP2O43734 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAF3IP2O43734 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAF3IP2O43734 AC011484.1-201ENST00000377652 1995 ntBASIC18.43■□□□□ 0.54
TRAF3IP2O43734 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAF3IP2O43734 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAF3IP2O43734 AC006015.1-201ENST00000429970 570 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms