Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PHGDHO43175 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHGDHO43175 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHGDHO43175 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHGDHO43175 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.61■□□□□ 0.89
PHGDHO43175 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHGDHO43175 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHGDHO43175 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.61■□□□□ 0.89
PHGDHO43175 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PHGDHO43175 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHGDHO43175 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.6■□□□□ 0.89
PHGDHO43175 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHGDHO43175 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PHGDHO43175 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHGDHO43175 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHGDHO43175 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PHGDHO43175 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHGDHO43175 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.6■□□□□ 0.89
PHGDHO43175 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.6■□□□□ 0.89
PHGDHO43175 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PHGDHO43175 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.6■□□□□ 0.89
PHGDHO43175 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PHGDHO43175 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.6■□□□□ 0.89
PHGDHO43175 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHGDHO43175 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHGDHO43175 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PHGDHO43175 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHGDHO43175 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHGDHO43175 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.59■□□□□ 0.89
PHGDHO43175 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHGDHO43175 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PHGDHO43175 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.59■□□□□ 0.89
PHGDHO43175 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHGDHO43175 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PHGDHO43175 GABARAPL3-202ENST00000624044 1851 ntBASIC20.59■□□□□ 0.89
PHGDHO43175 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PHGDHO43175 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
PHGDHO43175 AL358852.1-201ENST00000623174 1268 ntBASIC20.59■□□□□ 0.89
PHGDHO43175 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PHGDHO43175 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.59■□□□□ 0.89
PHGDHO43175 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
PHGDHO43175 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PHGDHO43175 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PHGDHO43175 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PHGDHO43175 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PHGDHO43175 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PHGDHO43175 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.58■□□□□ 0.89
PHGDHO43175 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHGDHO43175 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHGDHO43175 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHGDHO43175 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHGDHO43175 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHGDHO43175 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHGDHO43175 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.58■□□□□ 0.89
PHGDHO43175 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.58■□□□□ 0.89
PHGDHO43175 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PHGDHO43175 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.58■□□□□ 0.89
PHGDHO43175 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
PHGDHO43175 AC027702.1-201ENST00000563810 1770 ntBASIC20.58■□□□□ 0.89
PHGDHO43175 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PHGDHO43175 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PHGDHO43175 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PHGDHO43175 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PHGDHO43175 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PHGDHO43175 AC007225.1-201ENST00000566331 1836 ntBASIC20.57■□□□□ 0.88
PHGDHO43175 AP004607.4-201ENST00000530158 1459 ntBASIC20.57■□□□□ 0.88
PHGDHO43175 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PHGDHO43175 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHGDHO43175 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PHGDHO43175 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHGDHO43175 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.57■□□□□ 0.88
PHGDHO43175 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHGDHO43175 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHGDHO43175 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHGDHO43175 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.57■□□□□ 0.88
PHGDHO43175 AL391422.3-201ENST00000603791 2761 ntBASIC20.57■□□□□ 0.88
PHGDHO43175 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
PHGDHO43175 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PHGDHO43175 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHGDHO43175 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHGDHO43175 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHGDHO43175 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHGDHO43175 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PHGDHO43175 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PHGDHO43175 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHGDHO43175 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHGDHO43175 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.56■□□□□ 0.88
PHGDHO43175 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHGDHO43175 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PHGDHO43175 AC079140.4-201ENST00000507448 529 ntBASIC20.56■□□□□ 0.88
PHGDHO43175 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHGDHO43175 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHGDHO43175 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.56■□□□□ 0.88
PHGDHO43175 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHGDHO43175 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHGDHO43175 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PHGDHO43175 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.55■□□□□ 0.88
PHGDHO43175 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
PHGDHO43175 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PHGDHO43175 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms