Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.87■□□□□ 0.77
CACNA1AO00555 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.87■□□□□ 0.77
CACNA1AO00555 LINC01238-205ENST00000567549 1107 ntBASIC19.87■□□□□ 0.77
CACNA1AO00555 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CACNA1AO00555 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1AO00555 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1AO00555 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CACNA1AO00555 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1AO00555 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1AO00555 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.86■□□□□ 0.77
CACNA1AO00555 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.86■□□□□ 0.77
CACNA1AO00555 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
CACNA1AO00555 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1AO00555 AC022898.2-201ENST00000616822 1312 ntBASIC19.86■□□□□ 0.77
CACNA1AO00555 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CACNA1AO00555 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CACNA1AO00555 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1AO00555 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.86■□□□□ 0.77
CACNA1AO00555 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.86■□□□□ 0.77
CACNA1AO00555 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.86■□□□□ 0.77
CACNA1AO00555 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.86■□□□□ 0.77
CACNA1AO00555 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1AO00555 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CACNA1AO00555 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.86■□□□□ 0.77
CACNA1AO00555 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CACNA1AO00555 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CACNA1AO00555 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1AO00555 AC246785.2-201ENST00000432512 513 ntBASIC19.85■□□□□ 0.77
CACNA1AO00555 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.85■□□□□ 0.77
CACNA1AO00555 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1AO00555 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1AO00555 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CACNA1AO00555 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CACNA1AO00555 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1AO00555 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1AO00555 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1AO00555 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.85■□□□□ 0.77
CACNA1AO00555 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.85■□□□□ 0.77
CACNA1AO00555 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.85■□□□□ 0.77
CACNA1AO00555 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CACNA1AO00555 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1AO00555 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CACNA1AO00555 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.85■□□□□ 0.77
CACNA1AO00555 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.85■□□□□ 0.77
CACNA1AO00555 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1AO00555 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.84■□□□□ 0.77
CACNA1AO00555 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.84■□□□□ 0.77
CACNA1AO00555 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.84■□□□□ 0.77
CACNA1AO00555 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1AO00555 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1AO00555 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1AO00555 KRT18P68-201ENST00000392293 1000 ntBASIC19.84■□□□□ 0.77
CACNA1AO00555 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CACNA1AO00555 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CACNA1AO00555 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CACNA1AO00555 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1AO00555 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CACNA1AO00555 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CACNA1AO00555 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.84■□□□□ 0.77
CACNA1AO00555 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.84■□□□□ 0.77
CACNA1AO00555 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CACNA1AO00555 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.83■□□□□ 0.77
CACNA1AO00555 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.83■□□□□ 0.77
CACNA1AO00555 KRT8P10-201ENST00000450021 1447 ntBASIC19.83■□□□□ 0.77
CACNA1AO00555 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA1AO00555 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA1AO00555 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA1AO00555 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CACNA1AO00555 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.83■□□□□ 0.77
CACNA1AO00555 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.83■□□□□ 0.77
CACNA1AO00555 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA1AO00555 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA1AO00555 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.83■□□□□ 0.76
CACNA1AO00555 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA1AO00555 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CACNA1AO00555 MIR1238-201ENST00000408483 83 ntBASIC19.83■□□□□ 0.76
CACNA1AO00555 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA1AO00555 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.83■□□□□ 0.76
CACNA1AO00555 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.83■□□□□ 0.76
CACNA1AO00555 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA1AO00555 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CACNA1AO00555 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.82■□□□□ 0.76
CACNA1AO00555 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.82■□□□□ 0.76
CACNA1AO00555 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1AO00555 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CACNA1AO00555 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.82■□□□□ 0.76
CACNA1AO00555 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CACNA1AO00555 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1AO00555 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1AO00555 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1AO00555 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CACNA1AO00555 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CACNA1AO00555 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.81■□□□□ 0.76
CACNA1AO00555 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA1AO00555 NAPSB-206ENST00000562112 1266 ntBASIC19.81■□□□□ 0.76
CACNA1AO00555 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.81■□□□□ 0.76
CACNA1AO00555 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA1AO00555 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.81■□□□□ 0.76
CACNA1AO00555 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CACNA1AO00555 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms