Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN5O00501 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.95■■□□□ 1.1
CLDN5O00501 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CLDN5O00501 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN5O00501 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN5O00501 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CLDN5O00501 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.94■■□□□ 1.1
CLDN5O00501 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN5O00501 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.94■■□□□ 1.1
CLDN5O00501 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN5O00501 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN5O00501 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN5O00501 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN5O00501 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN5O00501 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.94■■□□□ 1.1
CLDN5O00501 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.94■■□□□ 1.1
CLDN5O00501 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.94■■□□□ 1.1
CLDN5O00501 RARRES2P4-201ENST00000514074 484 ntBASIC21.94■■□□□ 1.1
CLDN5O00501 OR10C1-204ENST00000622521 1039 ntBASIC21.94■■□□□ 1.1
CLDN5O00501 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
CLDN5O00501 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.94■■□□□ 1.1
CLDN5O00501 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CLDN5O00501 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.94■■□□□ 1.1
CLDN5O00501 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN5O00501 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN5O00501 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN5O00501 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN5O00501 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN5O00501 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN5O00501 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN5O00501 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN5O00501 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CLDN5O00501 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN5O00501 FEM1AP4-201ENST00000443167 1987 ntBASIC21.93■■□□□ 1.1
CLDN5O00501 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CLDN5O00501 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.93■■□□□ 1.1
CLDN5O00501 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.93■■□□□ 1.1
CLDN5O00501 AL138781.1-201ENST00000566567 1274 ntBASIC21.93■■□□□ 1.1
CLDN5O00501 AL162412.1-201ENST00000567129 965 ntBASIC21.93■■□□□ 1.1
CLDN5O00501 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.93■■□□□ 1.1
CLDN5O00501 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN5O00501 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.93■■□□□ 1.1
CLDN5O00501 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.93■■□□□ 1.1
CLDN5O00501 AC026310.3-201ENST00000625186 2373 ntBASIC21.93■■□□□ 1.1
CLDN5O00501 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.92■■□□□ 1.1
CLDN5O00501 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CLDN5O00501 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN5O00501 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN5O00501 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN5O00501 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.92■■□□□ 1.1
CLDN5O00501 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN5O00501 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN5O00501 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN5O00501 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN5O00501 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
CLDN5O00501 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN5O00501 CDV3P1-201ENST00000471403 739 ntBASIC21.91■■□□□ 1.1
CLDN5O00501 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.91■■□□□ 1.1
CLDN5O00501 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.91■■□□□ 1.1
CLDN5O00501 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.91■■□□□ 1.1
CLDN5O00501 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.91■■□□□ 1.1
CLDN5O00501 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN5O00501 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN5O00501 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN5O00501 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN5O00501 MKRN4P-201ENST00000444706 1521 ntBASIC21.9■■□□□ 1.1
CLDN5O00501 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CLDN5O00501 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.9■■□□□ 1.1
CLDN5O00501 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.9■■□□□ 1.1
CLDN5O00501 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CLDN5O00501 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CLDN5O00501 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CLDN5O00501 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
CLDN5O00501 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN5O00501 SLC29A4P1-201ENST00000398760 971 ntBASIC21.9■■□□□ 1.1
CLDN5O00501 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.9■■□□□ 1.1
CLDN5O00501 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.9■■□□□ 1.1
CLDN5O00501 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.9■■□□□ 1.1
CLDN5O00501 AC098934.4-201ENST00000564127 592 ntBASIC21.9■■□□□ 1.1
CLDN5O00501 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.9■■□□□ 1.1
CLDN5O00501 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.9■■□□□ 1.1
CLDN5O00501 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN5O00501 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN5O00501 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN5O00501 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CLDN5O00501 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CLDN5O00501 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CLDN5O00501 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CLDN5O00501 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN5O00501 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
CLDN5O00501 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN5O00501 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.89■■□□□ 1.09
CLDN5O00501 AC007322.3-201ENST00000426526 701 ntBASIC21.89■■□□□ 1.09
CLDN5O00501 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.89■■□□□ 1.09
CLDN5O00501 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.89■■□□□ 1.09
CLDN5O00501 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.89■■□□□ 1.09
CLDN5O00501 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.09
CLDN5O00501 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN5O00501 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
CLDN5O00501 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms