Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.03■□□□□ 0.8
CNOT1A5YKK6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.03■□□□□ 0.8
CNOT1A5YKK6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CNOT1A5YKK6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT1A5YKK6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CNOT1A5YKK6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT1A5YKK6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
CNOT1A5YKK6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CNOT1A5YKK6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT1A5YKK6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CNOT1A5YKK6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CNOT1A5YKK6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.03■□□□□ 0.8
CNOT1A5YKK6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT1A5YKK6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT1A5YKK6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT1A5YKK6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT1A5YKK6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT1A5YKK6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNOT1A5YKK6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT1A5YKK6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.02■□□□□ 0.8
CNOT1A5YKK6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.02■□□□□ 0.8
CNOT1A5YKK6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT1A5YKK6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT1A5YKK6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CNOT1A5YKK6 AC110285.5-201ENST00000611501 352 ntBASIC20.02■□□□□ 0.8
CNOT1A5YKK6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.02■□□□□ 0.8
CNOT1A5YKK6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
CNOT1A5YKK6 AC142381.3-201ENST00000568208 1670 ntBASIC20.02■□□□□ 0.8
CNOT1A5YKK6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT1A5YKK6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT1A5YKK6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT1A5YKK6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT1A5YKK6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.02■□□□□ 0.8
CNOT1A5YKK6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT1A5YKK6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.02■□□□□ 0.8
CNOT1A5YKK6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNOT1A5YKK6 AC005521.1-201ENST00000393351 872 ntBASIC20.02■□□□□ 0.8
CNOT1A5YKK6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.02■□□□□ 0.8
CNOT1A5YKK6 CDV3P1-201ENST00000471403 739 ntBASIC20.02■□□□□ 0.8
CNOT1A5YKK6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNOT1A5YKK6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.02■□□□□ 0.79
CNOT1A5YKK6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT1A5YKK6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT1A5YKK6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT1A5YKK6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CNOT1A5YKK6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT1A5YKK6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.01■□□□□ 0.79
CNOT1A5YKK6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.01■□□□□ 0.79
CNOT1A5YKK6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNOT1A5YKK6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.01■□□□□ 0.79
CNOT1A5YKK6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CNOT1A5YKK6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNOT1A5YKK6 KRASP1-201ENST00000407852 552 ntBASIC20■□□□□ 0.79
CNOT1A5YKK6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20■□□□□ 0.79
CNOT1A5YKK6 Six3os1_6.1-201ENST00000620790 196 ntBASIC20■□□□□ 0.79
CNOT1A5YKK6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT1A5YKK6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT1A5YKK6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT1A5YKK6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CNOT1A5YKK6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20■□□□□ 0.79
CNOT1A5YKK6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CNOT1A5YKK6 AC091799.1-201ENST00000422823 811 ntBASIC20■□□□□ 0.79
CNOT1A5YKK6 AC245052.3-201ENST00000450182 901 ntBASIC20■□□□□ 0.79
CNOT1A5YKK6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20■□□□□ 0.79
CNOT1A5YKK6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CNOT1A5YKK6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CNOT1A5YKK6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CNOT1A5YKK6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CNOT1A5YKK6 KRT18P22-201ENST00000402024 1347 ntBASIC19.99■□□□□ 0.79
CNOT1A5YKK6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
CNOT1A5YKK6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT1A5YKK6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.99■□□□□ 0.79
CNOT1A5YKK6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT1A5YKK6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNOT1A5YKK6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CNOT1A5YKK6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.99■□□□□ 0.79
CNOT1A5YKK6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.99■□□□□ 0.79
CNOT1A5YKK6 NUDT16P1-203ENST00000513809 620 ntBASIC19.99■□□□□ 0.79
CNOT1A5YKK6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CNOT1A5YKK6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.98■□□□□ 0.79
CNOT1A5YKK6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT1A5YKK6 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.98■□□□□ 0.79
CNOT1A5YKK6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.98■□□□□ 0.79
CNOT1A5YKK6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT1A5YKK6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.98■□□□□ 0.79
CNOT1A5YKK6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.98■□□□□ 0.79
CNOT1A5YKK6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CNOT1A5YKK6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNOT1A5YKK6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CNOT1A5YKK6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CNOT1A5YKK6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.98■□□□□ 0.79
CNOT1A5YKK6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNOT1A5YKK6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CNOT1A5YKK6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CNOT1A5YKK6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNOT1A5YKK6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CNOT1A5YKK6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.97■□□□□ 0.79
CNOT1A5YKK6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.97■□□□□ 0.79
CNOT1A5YKK6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.97■□□□□ 0.79
CNOT1A5YKK6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms