Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV4-1A0A0J9YWV2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV4-1A0A0J9YWV2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV4-1A0A0J9YWV2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV4-1A0A0J9YWV2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
TRBV4-1A0A0J9YWV2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 TSPY26P-201ENST00000476365 1326 ntBASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 AC099791.1-201ENST00000416440 715 ntBASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.01■□□□□ 0.63
TRBV4-1A0A0J9YWV2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV4-1A0A0J9YWV2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV4-1A0A0J9YWV2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRBV4-1A0A0J9YWV2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19■□□□□ 0.63
TRBV4-1A0A0J9YWV2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV4-1A0A0J9YWV2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19■□□□□ 0.63
TRBV4-1A0A0J9YWV2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRBV4-1A0A0J9YWV2 MPST-208ENST00000628507 698 ntTSL 5 BASIC19■□□□□ 0.63
TRBV4-1A0A0J9YWV2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV4-1A0A0J9YWV2 AC112907.3-201ENST00000577781 2400 ntBASIC19■□□□□ 0.63
TRBV4-1A0A0J9YWV2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19■□□□□ 0.63
TRBV4-1A0A0J9YWV2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRBV4-1A0A0J9YWV2 AL512408.1-201ENST00000569378 2000 ntBASIC19■□□□□ 0.63
TRBV4-1A0A0J9YWV2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV4-1A0A0J9YWV2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 AL162377.1-201ENST00000618844 1793 ntBASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.98■□□□□ 0.63
TRBV4-1A0A0J9YWV2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV4-1A0A0J9YWV2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV4-1A0A0J9YWV2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV4-1A0A0J9YWV2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV4-1A0A0J9YWV2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV4-1A0A0J9YWV2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.97■□□□□ 0.63
TRBV4-1A0A0J9YWV2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.97■□□□□ 0.63
TRBV4-1A0A0J9YWV2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
TRBV4-1A0A0J9YWV2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms