Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 MTX2-204ENST00000443241 799 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 AC027702.1-201ENST00000563810 1770 ntBASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV13-2A0A0B4J235 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 AC020763.4-201ENST00000623414 4170 ntBASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 KRT18P24-201ENST00000344739 1156 ntBASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 ABHD17AP4-201ENST00000411545 909 ntBASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TRAV13-2A0A0B4J235 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 GPX1-201ENST00000419349 1106 ntBASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 PLK5-205ENST00000642079 1969 ntBASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV13-2A0A0B4J235 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 MCC-208ENST00000514701 2855 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 SNX5-217ENST00000606557 1087 ntBASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 OR6D1P-202ENST00000641007 5290 ntBASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV13-2A0A0B4J235 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV13-2A0A0B4J235 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms