Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LSM5Q9Y4Y9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 AL020996.1-203ENST00000536896 2307 ntBASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LSM5Q9Y4Y9 AC020907.5-201ENST00000624372 1936 ntBASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 AC004987.1-201ENST00000428627 508 ntBASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 ATP5G2P3-201ENST00000429083 425 ntBASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 AC003102.1-202ENST00000563394 1796 ntBASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LSM5Q9Y4Y9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LSM5Q9Y4Y9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSM5Q9Y4Y9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.08■□□□□ 0.33
LSM5Q9Y4Y9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.08■□□□□ 0.33
LSM5Q9Y4Y9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSM5Q9Y4Y9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSM5Q9Y4Y9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LSM5Q9Y4Y9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSM5Q9Y4Y9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSM5Q9Y4Y9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSM5Q9Y4Y9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LSM5Q9Y4Y9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.08■□□□□ 0.32
LSM5Q9Y4Y9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LSM5Q9Y4Y9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LSM5Q9Y4Y9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSM5Q9Y4Y9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LSM5Q9Y4Y9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSM5Q9Y4Y9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LSM5Q9Y4Y9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
LSM5Q9Y4Y9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.08■□□□□ 0.32
LSM5Q9Y4Y9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LSM5Q9Y4Y9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LSM5Q9Y4Y9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.07■□□□□ 0.32
LSM5Q9Y4Y9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSM5Q9Y4Y9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSM5Q9Y4Y9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LSM5Q9Y4Y9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.07■□□□□ 0.32
LSM5Q9Y4Y9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSM5Q9Y4Y9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
LSM5Q9Y4Y9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LSM5Q9Y4Y9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.07■□□□□ 0.32
LSM5Q9Y4Y9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.07■□□□□ 0.32
LSM5Q9Y4Y9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LSM5Q9Y4Y9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.07■□□□□ 0.32
LSM5Q9Y4Y9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.07■□□□□ 0.32
LSM5Q9Y4Y9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LSM5Q9Y4Y9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.07■□□□□ 0.32
LSM5Q9Y4Y9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LSM5Q9Y4Y9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms