Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NOTCH3Q9UM47 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NOTCH3Q9UM47 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NOTCH3Q9UM47 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NOTCH3Q9UM47 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NOTCH3Q9UM47 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 RPS2P4-201ENST00000476944 856 ntBASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 AC079089.2-201ENST00000531211 1277 ntBASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 AP006294.2-201ENST00000641667 209 ntBASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NOTCH3Q9UM47 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 AC120498.10-201ENST00000621827 505 ntBASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 AC010980.2-201ENST00000587099 1412 ntBASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 AC073648.6-201ENST00000641589 218 ntBASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.96■□□□□ 0.15
NOTCH3Q9UM47 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NOTCH3Q9UM47 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NOTCH3Q9UM47 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NOTCH3Q9UM47 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 AC008175.2-201ENST00000612840 297 ntBASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 UNC93B4-201ENST00000505679 747 ntBASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NOTCH3Q9UM47 C1orf229-201ENST00000623686 2258 ntBASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms