Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.21■□□□□ 0.67
TMCC3Q9ULS5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMCC3Q9ULS5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.21■□□□□ 0.67
TMCC3Q9ULS5 SMUG1P1-201ENST00000590640 811 ntBASIC19.21■□□□□ 0.67
TMCC3Q9ULS5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMCC3Q9ULS5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.21■□□□□ 0.67
TMCC3Q9ULS5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMCC3Q9ULS5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TMCC3Q9ULS5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TMCC3Q9ULS5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.21■□□□□ 0.67
TMCC3Q9ULS5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 AC073314.1-201ENST00000568729 2216 ntBASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMCC3Q9ULS5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMCC3Q9ULS5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.18■□□□□ 0.66
TMCC3Q9ULS5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMCC3Q9ULS5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMCC3Q9ULS5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMCC3Q9ULS5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.18■□□□□ 0.66
TMCC3Q9ULS5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TMCC3Q9ULS5 MIR4466-201ENST00000606121 54 ntBASIC19.18■□□□□ 0.66
TMCC3Q9ULS5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.18■□□□□ 0.66
TMCC3Q9ULS5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.18■□□□□ 0.66
TMCC3Q9ULS5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.18■□□□□ 0.66
TMCC3Q9ULS5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
TMCC3Q9ULS5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMCC3Q9ULS5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TMCC3Q9ULS5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 AC009237.3-201ENST00000393279 1427 ntBASIC19.17■□□□□ 0.66
TMCC3Q9ULS5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMCC3Q9ULS5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TMCC3Q9ULS5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.16■□□□□ 0.66
TMCC3Q9ULS5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMCC3Q9ULS5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.16■□□□□ 0.66
TMCC3Q9ULS5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMCC3Q9ULS5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.16■□□□□ 0.66
TMCC3Q9ULS5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms