Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN2Q9UHD9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN2Q9UHD9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
UBQLN2Q9UHD9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN2Q9UHD9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN2Q9UHD9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.49■□□□□ 0.39
UBQLN2Q9UHD9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.49■□□□□ 0.39
UBQLN2Q9UHD9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN2Q9UHD9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN2Q9UHD9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN2Q9UHD9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN2Q9UHD9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN2Q9UHD9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 KRT18P24-201ENST00000344739 1156 ntBASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UBQLN2Q9UHD9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 AL035685.1-201ENST00000636663 812 ntBASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBQLN2Q9UHD9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN2Q9UHD9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.46■□□□□ 0.39
UBQLN2Q9UHD9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN2Q9UHD9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
UBQLN2Q9UHD9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.46■□□□□ 0.39
UBQLN2Q9UHD9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN2Q9UHD9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN2Q9UHD9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.46■□□□□ 0.39
UBQLN2Q9UHD9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN2Q9UHD9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN2Q9UHD9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
UBQLN2Q9UHD9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN2Q9UHD9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN2Q9UHD9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN2Q9UHD9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.46■□□□□ 0.39
UBQLN2Q9UHD9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBQLN2Q9UHD9 LINC01960-201ENST00000563759 1884 ntBASIC17.46■□□□□ 0.38
UBQLN2Q9UHD9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
UBQLN2Q9UHD9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.46■□□□□ 0.38
UBQLN2Q9UHD9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 AC011551.1-201ENST00000614101 683 ntBASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 AC090340.1-201ENST00000620778 4980 ntBASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 NEFHP1-201ENST00000412845 2629 ntBASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBQLN2Q9UHD9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms