Protein–RNA interactions for Protein: Q9NV12

TMEM140, Transmembrane protein 140, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM140Q9NV12 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.82■□□□□ 0.28
TMEM140Q9NV12 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.82■□□□□ 0.28
TMEM140Q9NV12 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.82■□□□□ 0.28
TMEM140Q9NV12 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM140Q9NV12 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.82■□□□□ 0.28
TMEM140Q9NV12 AP001330.3-201ENST00000520123 633 ntBASIC16.82■□□□□ 0.28
TMEM140Q9NV12 AC106739.1-201ENST00000617035 715 ntBASIC16.82■□□□□ 0.28
TMEM140Q9NV12 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM140Q9NV12 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.82■□□□□ 0.28
TMEM140Q9NV12 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM140Q9NV12 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM140Q9NV12 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM140Q9NV12 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM140Q9NV12 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM140Q9NV12 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TMEM140Q9NV12 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 EDA-201ENST00000338901 1233 ntBASIC16.81■□□□□ 0.28
TMEM140Q9NV12 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TMEM140Q9NV12 AC092667.1-201ENST00000434301 2586 ntBASIC16.81■□□□□ 0.28
TMEM140Q9NV12 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM140Q9NV12 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM140Q9NV12 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM140Q9NV12 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM140Q9NV12 MIR572-201ENST00000384983 95 ntBASIC16.8■□□□□ 0.28
TMEM140Q9NV12 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.8■□□□□ 0.28
TMEM140Q9NV12 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM140Q9NV12 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM140Q9NV12 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TMEM140Q9NV12 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.8■□□□□ 0.28
TMEM140Q9NV12 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM140Q9NV12 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM140Q9NV12 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.8■□□□□ 0.28
TMEM140Q9NV12 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM140Q9NV12 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TMEM140Q9NV12 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM140Q9NV12 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM140Q9NV12 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM140Q9NV12 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 RASA4CP-201ENST00000424092 1398 ntBASIC16.79■□□□□ 0.28
TMEM140Q9NV12 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 GABARAPL3-202ENST00000624044 1851 ntBASIC16.79■□□□□ 0.28
TMEM140Q9NV12 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TMEM140Q9NV12 AP005212.1-201ENST00000581547 1997 ntBASIC16.78■□□□□ 0.28
TMEM140Q9NV12 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.78■□□□□ 0.28
TMEM140Q9NV12 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM140Q9NV12 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM140Q9NV12 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM140Q9NV12 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.78■□□□□ 0.28
TMEM140Q9NV12 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TMEM140Q9NV12 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM140Q9NV12 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM140Q9NV12 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM140Q9NV12 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TMEM140Q9NV12 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.78■□□□□ 0.28
TMEM140Q9NV12 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.78■□□□□ 0.28
TMEM140Q9NV12 AF213884.3-201ENST00000563833 479 ntBASIC16.78■□□□□ 0.28
TMEM140Q9NV12 AL355001.2-201ENST00000620617 1191 ntBASIC16.78■□□□□ 0.28
TMEM140Q9NV12 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms