Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS2Q9NRF8 AC027612.3-201ENST00000413684 1047 ntBASIC19.28■□□□□ 0.68
CTPS2Q9NRF8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.28■□□□□ 0.68
CTPS2Q9NRF8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS2Q9NRF8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS2Q9NRF8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS2Q9NRF8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS2Q9NRF8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTPS2Q9NRF8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.27■□□□□ 0.68
CTPS2Q9NRF8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS2Q9NRF8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.27■□□□□ 0.68
CTPS2Q9NRF8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CTPS2Q9NRF8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS2Q9NRF8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS2Q9NRF8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS2Q9NRF8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.27■□□□□ 0.68
CTPS2Q9NRF8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS2Q9NRF8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS2Q9NRF8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CTPS2Q9NRF8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS2Q9NRF8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.27■□□□□ 0.68
CTPS2Q9NRF8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.27■□□□□ 0.68
CTPS2Q9NRF8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS2Q9NRF8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTPS2Q9NRF8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.27■□□□□ 0.68
CTPS2Q9NRF8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CTPS2Q9NRF8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CTPS2Q9NRF8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CTPS2Q9NRF8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTPS2Q9NRF8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTPS2Q9NRF8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTPS2Q9NRF8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTPS2Q9NRF8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTPS2Q9NRF8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.27■□□□□ 0.67
CTPS2Q9NRF8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.26■□□□□ 0.67
CTPS2Q9NRF8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS2Q9NRF8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CTPS2Q9NRF8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS2Q9NRF8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS2Q9NRF8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS2Q9NRF8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS2Q9NRF8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS2Q9NRF8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS2Q9NRF8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS2Q9NRF8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS2Q9NRF8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.26■□□□□ 0.67
CTPS2Q9NRF8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS2Q9NRF8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTPS2Q9NRF8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.26■□□□□ 0.67
CTPS2Q9NRF8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CTPS2Q9NRF8 AC092667.1-201ENST00000434301 2586 ntBASIC19.26■□□□□ 0.67
CTPS2Q9NRF8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CTPS2Q9NRF8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 PLK5-205ENST00000642079 1969 ntBASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.25■□□□□ 0.67
CTPS2Q9NRF8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS2Q9NRF8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS2Q9NRF8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS2Q9NRF8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.24■□□□□ 0.67
CTPS2Q9NRF8 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.24■□□□□ 0.67
CTPS2Q9NRF8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.24■□□□□ 0.67
CTPS2Q9NRF8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CTPS2Q9NRF8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS2Q9NRF8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS2Q9NRF8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.24■□□□□ 0.67
CTPS2Q9NRF8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS2Q9NRF8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS2Q9NRF8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CTPS2Q9NRF8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CTPS2Q9NRF8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS2Q9NRF8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.24■□□□□ 0.67
CTPS2Q9NRF8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS2Q9NRF8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTPS2Q9NRF8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTPS2Q9NRF8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTPS2Q9NRF8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms