Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CSNK1G1Q9HCP0 AC093787.1-201ENST00000450396 207 ntBASIC21.85■■□□□ 1.09
CSNK1G1Q9HCP0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.85■■□□□ 1.09
CSNK1G1Q9HCP0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.85■■□□□ 1.09
CSNK1G1Q9HCP0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.85■■□□□ 1.09
CSNK1G1Q9HCP0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CSNK1G1Q9HCP0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.85■■□□□ 1.09
CSNK1G1Q9HCP0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CSNK1G1Q9HCP0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.84■■□□□ 1.09
CSNK1G1Q9HCP0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CSNK1G1Q9HCP0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.84■■□□□ 1.09
CSNK1G1Q9HCP0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSNK1G1Q9HCP0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CSNK1G1Q9HCP0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSNK1G1Q9HCP0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.84■■□□□ 1.09
CSNK1G1Q9HCP0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CSNK1G1Q9HCP0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CSNK1G1Q9HCP0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
CSNK1G1Q9HCP0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CSNK1G1Q9HCP0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CSNK1G1Q9HCP0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.84■■□□□ 1.09
CSNK1G1Q9HCP0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSNK1G1Q9HCP0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSNK1G1Q9HCP0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CSNK1G1Q9HCP0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSNK1G1Q9HCP0 AC116050.2-201ENST00000612102 1779 ntBASIC21.84■■□□□ 1.09
CSNK1G1Q9HCP0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 AL024507.2-201ENST00000606070 2574 ntBASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 AC007322.3-201ENST00000426526 701 ntBASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 AC142086.2-201ENST00000569753 217 ntBASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.83■■□□□ 1.09
CSNK1G1Q9HCP0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
CSNK1G1Q9HCP0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
CSNK1G1Q9HCP0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CSNK1G1Q9HCP0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CSNK1G1Q9HCP0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
CSNK1G1Q9HCP0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1G1Q9HCP0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1G1Q9HCP0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.82■■□□□ 1.08
CSNK1G1Q9HCP0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1G1Q9HCP0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1G1Q9HCP0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1G1Q9HCP0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1G1Q9HCP0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1G1Q9HCP0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.82■■□□□ 1.08
CSNK1G1Q9HCP0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.82■■□□□ 1.08
CSNK1G1Q9HCP0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
CSNK1G1Q9HCP0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1G1Q9HCP0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
CSNK1G1Q9HCP0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSNK1G1Q9HCP0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.82■■□□□ 1.08
CSNK1G1Q9HCP0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1G1Q9HCP0 AC010980.2-201ENST00000587099 1412 ntBASIC21.81■■□□□ 1.08
CSNK1G1Q9HCP0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1G1Q9HCP0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
CSNK1G1Q9HCP0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CSNK1G1Q9HCP0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1G1Q9HCP0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.81■■□□□ 1.08
CSNK1G1Q9HCP0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.81■■□□□ 1.08
CSNK1G1Q9HCP0 AC100791.3-201ENST00000617619 330 ntBASIC21.81■■□□□ 1.08
CSNK1G1Q9HCP0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.81■■□□□ 1.08
CSNK1G1Q9HCP0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSNK1G1Q9HCP0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CSNK1G1Q9HCP0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CSNK1G1Q9HCP0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.8■■□□□ 1.08
CSNK1G1Q9HCP0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1G1Q9HCP0 FEM1AP4-201ENST00000443167 1987 ntBASIC21.8■■□□□ 1.08
CSNK1G1Q9HCP0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1G1Q9HCP0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.8■■□□□ 1.08
CSNK1G1Q9HCP0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1G1Q9HCP0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.8■■□□□ 1.08
CSNK1G1Q9HCP0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1G1Q9HCP0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CSNK1G1Q9HCP0 MKRN4P-201ENST00000444706 1521 ntBASIC21.8■■□□□ 1.08
CSNK1G1Q9HCP0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSNK1G1Q9HCP0 AL049796.1-201ENST00000565336 1766 ntBASIC21.79■■□□□ 1.08
CSNK1G1Q9HCP0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CSNK1G1Q9HCP0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
CSNK1G1Q9HCP0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.79■■□□□ 1.08
CSNK1G1Q9HCP0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1G1Q9HCP0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1G1Q9HCP0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1G1Q9HCP0 SLC29A4P1-201ENST00000398760 971 ntBASIC21.79■■□□□ 1.08
CSNK1G1Q9HCP0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.79■■□□□ 1.08
CSNK1G1Q9HCP0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CSNK1G1Q9HCP0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms