Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRTM1Q9HBL6 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.97■□□□□ 0.79
LRTM1Q9HBL6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LRTM1Q9HBL6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
LRTM1Q9HBL6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.97■□□□□ 0.79
LRTM1Q9HBL6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRTM1Q9HBL6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.97■□□□□ 0.79
LRTM1Q9HBL6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRTM1Q9HBL6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 AL358852.1-201ENST00000623174 1268 ntBASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRTM1Q9HBL6 AC061975.6-201ENST00000579045 1553 ntBASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 AP004607.4-201ENST00000530158 1459 ntBASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 MIR638-201ENST00000385237 100 ntBASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 AC142381.2-201ENST00000566120 298 ntBASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 AC092667.1-201ENST00000434301 2586 ntBASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRTM1Q9HBL6 GABARAPL3-202ENST00000624044 1851 ntBASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 AP005212.1-201ENST00000581547 1997 ntBASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRTM1Q9HBL6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.93■□□□□ 0.78
LRTM1Q9HBL6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRTM1Q9HBL6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRTM1Q9HBL6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRTM1Q9HBL6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRTM1Q9HBL6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRTM1Q9HBL6 AC073314.1-201ENST00000568729 2216 ntBASIC19.93■□□□□ 0.78
LRTM1Q9HBL6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRTM1Q9HBL6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.93■□□□□ 0.78
LRTM1Q9HBL6 MIR6084-201ENST00000622012 110 ntBASIC19.93■□□□□ 0.78
LRTM1Q9HBL6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.93■□□□□ 0.78
LRTM1Q9HBL6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
LRTM1Q9HBL6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
LRTM1Q9HBL6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.93■□□□□ 0.78
LRTM1Q9HBL6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRTM1Q9HBL6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LRTM1Q9HBL6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRTM1Q9HBL6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRTM1Q9HBL6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRTM1Q9HBL6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRTM1Q9HBL6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LRTM1Q9HBL6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRTM1Q9HBL6 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.92■□□□□ 0.78
LRTM1Q9HBL6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.92■□□□□ 0.78
LRTM1Q9HBL6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRTM1Q9HBL6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms