Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
SCAF1Q9H7N4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC30.79■■■□□ 2.52
SCAF1Q9H7N4 MIPEPP3-201ENST00000412105 444 ntBASIC30.79■■■□□ 2.52
SCAF1Q9H7N4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
SCAF1Q9H7N4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC30.79■■■□□ 2.52
SCAF1Q9H7N4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
SCAF1Q9H7N4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
SCAF1Q9H7N4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC30.79■■■□□ 2.52
SCAF1Q9H7N4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
SCAF1Q9H7N4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC30.79■■■□□ 2.52
SCAF1Q9H7N4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
SCAF1Q9H7N4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
SCAF1Q9H7N4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
SCAF1Q9H7N4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SCAF1Q9H7N4 GXYLT1P3-201ENST00000453058 1193 ntBASIC30.78■■■□□ 2.52
SCAF1Q9H7N4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC30.78■■■□□ 2.52
SCAF1Q9H7N4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
SCAF1Q9H7N4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC30.78■■■□□ 2.52
SCAF1Q9H7N4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
SCAF1Q9H7N4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SCAF1Q9H7N4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC30.78■■■□□ 2.52
SCAF1Q9H7N4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SCAF1Q9H7N4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC30.78■■■□□ 2.52
SCAF1Q9H7N4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SCAF1Q9H7N4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SCAF1Q9H7N4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SCAF1Q9H7N4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC30.78■■■□□ 2.52
SCAF1Q9H7N4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC30.78■■■□□ 2.52
SCAF1Q9H7N4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
SCAF1Q9H7N4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC30.77■■■□□ 2.52
SCAF1Q9H7N4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC30.77■■■□□ 2.52
SCAF1Q9H7N4 AP001002.2-201ENST00000625137 386 ntBASIC30.77■■■□□ 2.52
SCAF1Q9H7N4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SCAF1Q9H7N4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC30.77■■■□□ 2.52
SCAF1Q9H7N4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SCAF1Q9H7N4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SCAF1Q9H7N4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
SCAF1Q9H7N4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.52
SCAF1Q9H7N4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.52
SCAF1Q9H7N4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.52
SCAF1Q9H7N4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.52
SCAF1Q9H7N4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC30.76■■■□□ 2.52
SCAF1Q9H7N4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
SCAF1Q9H7N4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC30.76■■■□□ 2.52
SCAF1Q9H7N4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC30.76■■■□□ 2.52
SCAF1Q9H7N4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC30.76■■■□□ 2.52
SCAF1Q9H7N4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
SCAF1Q9H7N4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
SCAF1Q9H7N4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC30.76■■■□□ 2.51
SCAF1Q9H7N4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SCAF1Q9H7N4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SCAF1Q9H7N4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SCAF1Q9H7N4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SCAF1Q9H7N4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
SCAF1Q9H7N4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
SCAF1Q9H7N4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SCAF1Q9H7N4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC30.75■■■□□ 2.51
SCAF1Q9H7N4 CNN2P6-201ENST00000439038 900 ntBASIC30.75■■■□□ 2.51
SCAF1Q9H7N4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC30.75■■■□□ 2.51
SCAF1Q9H7N4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC30.75■■■□□ 2.51
SCAF1Q9H7N4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC30.75■■■□□ 2.51
SCAF1Q9H7N4 MYCNOS-205ENST00000641950 531 ntBASIC30.75■■■□□ 2.51
SCAF1Q9H7N4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SCAF1Q9H7N4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC30.75■■■□□ 2.51
SCAF1Q9H7N4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC30.75■■■□□ 2.51
SCAF1Q9H7N4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC30.75■■■□□ 2.51
SCAF1Q9H7N4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SCAF1Q9H7N4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC30.75■■■□□ 2.51
SCAF1Q9H7N4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC30.74■■■□□ 2.51
SCAF1Q9H7N4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
SCAF1Q9H7N4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC30.74■■■□□ 2.51
SCAF1Q9H7N4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SCAF1Q9H7N4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SCAF1Q9H7N4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
SCAF1Q9H7N4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SCAF1Q9H7N4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SCAF1Q9H7N4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SCAF1Q9H7N4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SCAF1Q9H7N4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
SCAF1Q9H7N4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SCAF1Q9H7N4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC30.74■■■□□ 2.51
SCAF1Q9H7N4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
SCAF1Q9H7N4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SCAF1Q9H7N4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SCAF1Q9H7N4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
SCAF1Q9H7N4 APTR-203ENST00000430801 583 ntTSL 5 BASIC30.73■■■□□ 2.51
SCAF1Q9H7N4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC30.73■■■□□ 2.51
SCAF1Q9H7N4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC30.73■■■□□ 2.51
SCAF1Q9H7N4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SCAF1Q9H7N4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SCAF1Q9H7N4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC30.73■■■□□ 2.51
SCAF1Q9H7N4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SCAF1Q9H7N4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SCAF1Q9H7N4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
SCAF1Q9H7N4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC30.73■■■□□ 2.51
SCAF1Q9H7N4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SCAF1Q9H7N4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC30.73■■■□□ 2.51
SCAF1Q9H7N4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC30.73■■■□□ 2.51
SCAF1Q9H7N4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC30.73■■■□□ 2.51
SCAF1Q9H7N4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC30.73■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms