Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.77■□□□□ 0.76
PIF1Q9H611 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.77■□□□□ 0.76
PIF1Q9H611 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PIF1Q9H611 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.77■□□□□ 0.76
PIF1Q9H611 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PIF1Q9H611 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PIF1Q9H611 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PIF1Q9H611 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
PIF1Q9H611 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PIF1Q9H611 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.77■□□□□ 0.76
PIF1Q9H611 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.77■□□□□ 0.76
PIF1Q9H611 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PIF1Q9H611 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PIF1Q9H611 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PIF1Q9H611 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PIF1Q9H611 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PIF1Q9H611 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.77■□□□□ 0.75
PIF1Q9H611 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.77■□□□□ 0.75
PIF1Q9H611 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PIF1Q9H611 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PIF1Q9H611 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PIF1Q9H611 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.76■□□□□ 0.75
PIF1Q9H611 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PIF1Q9H611 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PIF1Q9H611 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PIF1Q9H611 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PIF1Q9H611 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PIF1Q9H611 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PIF1Q9H611 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PIF1Q9H611 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.76■□□□□ 0.75
PIF1Q9H611 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PIF1Q9H611 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PIF1Q9H611 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PIF1Q9H611 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PIF1Q9H611 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PIF1Q9H611 AC011298.3-201ENST00000615796 283 ntBASIC19.76■□□□□ 0.75
PIF1Q9H611 AC136469.2-201ENST00000623944 1028 ntBASIC19.76■□□□□ 0.75
PIF1Q9H611 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.76■□□□□ 0.75
PIF1Q9H611 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
PIF1Q9H611 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PIF1Q9H611 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.76■□□□□ 0.75
PIF1Q9H611 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PIF1Q9H611 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PIF1Q9H611 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PIF1Q9H611 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PIF1Q9H611 AC027702.1-201ENST00000563810 1770 ntBASIC19.75■□□□□ 0.75
PIF1Q9H611 AC112907.3-201ENST00000577781 2400 ntBASIC19.75■□□□□ 0.75
PIF1Q9H611 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PIF1Q9H611 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.75■□□□□ 0.75
PIF1Q9H611 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PIF1Q9H611 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PIF1Q9H611 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PIF1Q9H611 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.75■□□□□ 0.75
PIF1Q9H611 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PIF1Q9H611 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PIF1Q9H611 AC121338.2-201ENST00000622535 1744 ntBASIC19.75■□□□□ 0.75
PIF1Q9H611 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PIF1Q9H611 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
PIF1Q9H611 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.75■□□□□ 0.75
PIF1Q9H611 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PIF1Q9H611 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PIF1Q9H611 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PIF1Q9H611 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PIF1Q9H611 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PIF1Q9H611 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.75■□□□□ 0.75
PIF1Q9H611 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIF1Q9H611 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIF1Q9H611 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PIF1Q9H611 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIF1Q9H611 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PIF1Q9H611 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIF1Q9H611 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIF1Q9H611 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PIF1Q9H611 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
PIF1Q9H611 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.74■□□□□ 0.75
PIF1Q9H611 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.74■□□□□ 0.75
PIF1Q9H611 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PIF1Q9H611 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.74■□□□□ 0.75
PIF1Q9H611 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIF1Q9H611 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.74■□□□□ 0.75
PIF1Q9H611 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIF1Q9H611 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PIF1Q9H611 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PIF1Q9H611 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIF1Q9H611 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PIF1Q9H611 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.74■□□□□ 0.75
PIF1Q9H611 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIF1Q9H611 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PIF1Q9H611 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PIF1Q9H611 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIF1Q9H611 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIF1Q9H611 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIF1Q9H611 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIF1Q9H611 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIF1Q9H611 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.73■□□□□ 0.75
PIF1Q9H611 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
PIF1Q9H611 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PIF1Q9H611 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.73■□□□□ 0.75
PIF1Q9H611 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIF1Q9H611 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms