Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
NUCKS1Q9H1E3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NUCKS1Q9H1E3 AP005212.1-201ENST00000581547 1997 ntBASIC22.51■■□□□ 1.19
NUCKS1Q9H1E3 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.51■■□□□ 1.19
NUCKS1Q9H1E3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.51■■□□□ 1.19
NUCKS1Q9H1E3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.51■■□□□ 1.19
NUCKS1Q9H1E3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
NUCKS1Q9H1E3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
NUCKS1Q9H1E3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
NUCKS1Q9H1E3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
NUCKS1Q9H1E3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NUCKS1Q9H1E3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NUCKS1Q9H1E3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NUCKS1Q9H1E3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.5■■□□□ 1.19
NUCKS1Q9H1E3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.5■■□□□ 1.19
NUCKS1Q9H1E3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
NUCKS1Q9H1E3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.5■■□□□ 1.19
NUCKS1Q9H1E3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
NUCKS1Q9H1E3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.5■■□□□ 1.19
NUCKS1Q9H1E3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NUCKS1Q9H1E3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.5■■□□□ 1.19
NUCKS1Q9H1E3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
NUCKS1Q9H1E3 AL354811.1-201ENST00000610286 706 ntBASIC22.5■■□□□ 1.19
NUCKS1Q9H1E3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NUCKS1Q9H1E3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 AC097381.1-201ENST00000429019 1296 ntBASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 MIR6821-201ENST00000617625 74 ntBASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
NUCKS1Q9H1E3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 AC027612.3-201ENST00000413684 1047 ntBASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 AC053503.5-201ENST00000601508 636 ntBASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 AC087623.3-201ENST00000607047 1098 ntBASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NUCKS1Q9H1E3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NUCKS1Q9H1E3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NUCKS1Q9H1E3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.46■■□□□ 1.19
NUCKS1Q9H1E3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NUCKS1Q9H1E3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.46■■□□□ 1.19
NUCKS1Q9H1E3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NUCKS1Q9H1E3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.46■■□□□ 1.19
NUCKS1Q9H1E3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
NUCKS1Q9H1E3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
NUCKS1Q9H1E3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.45■■□□□ 1.19
NUCKS1Q9H1E3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
NUCKS1Q9H1E3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
NUCKS1Q9H1E3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
NUCKS1Q9H1E3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NUCKS1Q9H1E3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.45■■□□□ 1.18
NUCKS1Q9H1E3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.45■■□□□ 1.18
NUCKS1Q9H1E3 YBX1P1-201ENST00000445822 960 ntBASIC22.45■■□□□ 1.18
NUCKS1Q9H1E3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NUCKS1Q9H1E3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.45■■□□□ 1.18
NUCKS1Q9H1E3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms