Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
DDX47Q9H0S4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
DDX47Q9H0S4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.64■■□□□ 1.05
DDX47Q9H0S4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.64■■□□□ 1.05
DDX47Q9H0S4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.64■■□□□ 1.05
DDX47Q9H0S4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
DDX47Q9H0S4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
DDX47Q9H0S4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX47Q9H0S4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX47Q9H0S4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
DDX47Q9H0S4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX47Q9H0S4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX47Q9H0S4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DDX47Q9H0S4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
DDX47Q9H0S4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX47Q9H0S4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
DDX47Q9H0S4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.63■■□□□ 1.05
DDX47Q9H0S4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DDX47Q9H0S4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
DDX47Q9H0S4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
DDX47Q9H0S4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
DDX47Q9H0S4 AC133561.4-201ENST00000566112 224 ntBASIC21.63■■□□□ 1.05
DDX47Q9H0S4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX47Q9H0S4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX47Q9H0S4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DDX47Q9H0S4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX47Q9H0S4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.63■■□□□ 1.05
DDX47Q9H0S4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.63■■□□□ 1.05
DDX47Q9H0S4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
DDX47Q9H0S4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX47Q9H0S4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DDX47Q9H0S4 AL512408.1-201ENST00000569378 2000 ntBASIC21.62■■□□□ 1.05
DDX47Q9H0S4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
DDX47Q9H0S4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DDX47Q9H0S4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.62■■□□□ 1.05
DDX47Q9H0S4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX47Q9H0S4 AL356441.2-201ENST00000443009 864 ntBASIC21.62■■□□□ 1.05
DDX47Q9H0S4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.62■■□□□ 1.05
DDX47Q9H0S4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.62■■□□□ 1.05
DDX47Q9H0S4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DDX47Q9H0S4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
DDX47Q9H0S4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.62■■□□□ 1.05
DDX47Q9H0S4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DDX47Q9H0S4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.62■■□□□ 1.05
DDX47Q9H0S4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.62■■□□□ 1.05
DDX47Q9H0S4 FP700111.2-201ENST00000619190 1892 ntBASIC21.62■■□□□ 1.05
DDX47Q9H0S4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX47Q9H0S4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX47Q9H0S4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
DDX47Q9H0S4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX47Q9H0S4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.61■■□□□ 1.05
DDX47Q9H0S4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX47Q9H0S4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX47Q9H0S4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
DDX47Q9H0S4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DDX47Q9H0S4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.61■■□□□ 1.05
DDX47Q9H0S4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.61■■□□□ 1.05
DDX47Q9H0S4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.61■■□□□ 1.05
DDX47Q9H0S4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.61■■□□□ 1.05
DDX47Q9H0S4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX47Q9H0S4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
DDX47Q9H0S4 AC055733.4-201ENST00000638462 1354 ntBASIC21.61■■□□□ 1.05
DDX47Q9H0S4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX47Q9H0S4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX47Q9H0S4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.6■■□□□ 1.05
DDX47Q9H0S4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX47Q9H0S4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.6■■□□□ 1.05
DDX47Q9H0S4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.6■■□□□ 1.05
DDX47Q9H0S4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DDX47Q9H0S4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.6■■□□□ 1.05
DDX47Q9H0S4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX47Q9H0S4 AC131281.2-201ENST00000520478 145 ntBASIC21.6■■□□□ 1.05
DDX47Q9H0S4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX47Q9H0S4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX47Q9H0S4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX47Q9H0S4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.6■■□□□ 1.05
DDX47Q9H0S4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX47Q9H0S4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
DDX47Q9H0S4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX47Q9H0S4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
DDX47Q9H0S4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX47Q9H0S4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.59■■□□□ 1.05
DDX47Q9H0S4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX47Q9H0S4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX47Q9H0S4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.59■■□□□ 1.05
DDX47Q9H0S4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX47Q9H0S4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DDX47Q9H0S4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.59■■□□□ 1.05
DDX47Q9H0S4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
DDX47Q9H0S4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX47Q9H0S4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DDX47Q9H0S4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.59■■□□□ 1.05
DDX47Q9H0S4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
DDX47Q9H0S4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX47Q9H0S4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
DDX47Q9H0S4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.58■■□□□ 1.05
DDX47Q9H0S4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.58■■□□□ 1.05
DDX47Q9H0S4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX47Q9H0S4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
DDX47Q9H0S4 AL162377.1-201ENST00000618844 1793 ntBASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms