Protein–RNA interactions for Protein: Q9BSG5

RTBDN, Retbindin, humanhuman

Predicted RBP Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDNQ9BSG5 SMG8-203ENST00000578922 2178 ntBASIC17.23■□□□□ 0.35
RTBDNQ9BSG5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.23■□□□□ 0.35
RTBDNQ9BSG5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RTBDNQ9BSG5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTBDNQ9BSG5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RTBDNQ9BSG5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTBDNQ9BSG5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RTBDNQ9BSG5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.22■□□□□ 0.35
RTBDNQ9BSG5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTBDNQ9BSG5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTBDNQ9BSG5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.22■□□□□ 0.35
RTBDNQ9BSG5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTBDNQ9BSG5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.22■□□□□ 0.35
RTBDNQ9BSG5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTBDNQ9BSG5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTBDNQ9BSG5 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTBDNQ9BSG5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RTBDNQ9BSG5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RTBDNQ9BSG5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTBDNQ9BSG5 UNC93B8-201ENST00000511903 705 ntBASIC17.22■□□□□ 0.35
RTBDNQ9BSG5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.22■□□□□ 0.35
RTBDNQ9BSG5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.22■□□□□ 0.35
RTBDNQ9BSG5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTBDNQ9BSG5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 AP005435.1-201ENST00000529293 1178 ntBASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.21■□□□□ 0.35
RTBDNQ9BSG5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RTBDNQ9BSG5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
RTBDNQ9BSG5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RTBDNQ9BSG5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 AL020996.1-203ENST00000536896 2307 ntBASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RTBDNQ9BSG5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTBDNQ9BSG5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RTBDNQ9BSG5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
RTBDNQ9BSG5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTBDNQ9BSG5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTBDNQ9BSG5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTBDNQ9BSG5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTBDNQ9BSG5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.19■□□□□ 0.34
RTBDNQ9BSG5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RTBDNQ9BSG5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTBDNQ9BSG5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.19■□□□□ 0.34
RTBDNQ9BSG5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTBDNQ9BSG5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTBDNQ9BSG5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.19■□□□□ 0.34
RTBDNQ9BSG5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTBDNQ9BSG5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.18■□□□□ 0.34
RTBDNQ9BSG5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTBDNQ9BSG5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTBDNQ9BSG5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.18■□□□□ 0.34
RTBDNQ9BSG5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.18■□□□□ 0.34
RTBDNQ9BSG5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTBDNQ9BSG5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTBDNQ9BSG5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTBDNQ9BSG5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTBDNQ9BSG5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RTBDNQ9BSG5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTBDNQ9BSG5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTBDNQ9BSG5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RTBDNQ9BSG5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTBDNQ9BSG5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms