Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC3Q96DC8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.87■□□□□ 0.93
ECHDC3Q96DC8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC3Q96DC8 AL024507.2-201ENST00000606070 2574 ntBASIC20.87■□□□□ 0.93
ECHDC3Q96DC8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC3Q96DC8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC3Q96DC8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ECHDC3Q96DC8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
ECHDC3Q96DC8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.87■□□□□ 0.93
ECHDC3Q96DC8 AC016405.3-201ENST00000607710 860 ntBASIC20.87■□□□□ 0.93
ECHDC3Q96DC8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC3Q96DC8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.87■□□□□ 0.93
ECHDC3Q96DC8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC3Q96DC8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ECHDC3Q96DC8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
ECHDC3Q96DC8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC3Q96DC8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC3Q96DC8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.86■□□□□ 0.93
ECHDC3Q96DC8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ECHDC3Q96DC8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ECHDC3Q96DC8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC3Q96DC8 ID1-201ENST00000376105 1233 ntBASIC20.86■□□□□ 0.93
ECHDC3Q96DC8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.86■□□□□ 0.93
ECHDC3Q96DC8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.86■□□□□ 0.93
ECHDC3Q96DC8 OR10C1-204ENST00000622521 1039 ntBASIC20.86■□□□□ 0.93
ECHDC3Q96DC8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.86■□□□□ 0.93
ECHDC3Q96DC8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ECHDC3Q96DC8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ECHDC3Q96DC8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.86■□□□□ 0.93
ECHDC3Q96DC8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.85■□□□□ 0.93
ECHDC3Q96DC8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ECHDC3Q96DC8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ECHDC3Q96DC8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ECHDC3Q96DC8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.85■□□□□ 0.93
ECHDC3Q96DC8 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.85■□□□□ 0.93
ECHDC3Q96DC8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ECHDC3Q96DC8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.85■□□□□ 0.93
ECHDC3Q96DC8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.85■□□□□ 0.93
ECHDC3Q96DC8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.85■□□□□ 0.93
ECHDC3Q96DC8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.85■□□□□ 0.93
ECHDC3Q96DC8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.85■□□□□ 0.93
ECHDC3Q96DC8 FAM21FP-204ENST00000608637 956 ntBASIC20.85■□□□□ 0.93
ECHDC3Q96DC8 AL121832.2-201ENST00000610979 668 ntBASIC20.85■□□□□ 0.93
ECHDC3Q96DC8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.85■□□□□ 0.93
ECHDC3Q96DC8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ECHDC3Q96DC8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ECHDC3Q96DC8 FEM1AP4-201ENST00000443167 1987 ntBASIC20.85■□□□□ 0.93
ECHDC3Q96DC8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 RARRES2P4-201ENST00000514074 484 ntBASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 AC069236.1-201ENST00000604339 616 ntBASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ECHDC3Q96DC8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ECHDC3Q96DC8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ECHDC3Q96DC8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ECHDC3Q96DC8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ECHDC3Q96DC8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ECHDC3Q96DC8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
ECHDC3Q96DC8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.83■□□□□ 0.93
ECHDC3Q96DC8 GPX1P1-201ENST00000388829 606 ntBASIC20.83■□□□□ 0.93
ECHDC3Q96DC8 AL512625.2-201ENST00000417533 625 ntBASIC20.83■□□□□ 0.93
ECHDC3Q96DC8 GUSBP6-202ENST00000438529 1198 ntBASIC20.83■□□□□ 0.93
ECHDC3Q96DC8 CDV3P1-201ENST00000471403 739 ntBASIC20.83■□□□□ 0.93
ECHDC3Q96DC8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ECHDC3Q96DC8 AC083906.2-201ENST00000511578 360 ntBASIC20.83■□□□□ 0.93
ECHDC3Q96DC8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ECHDC3Q96DC8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ECHDC3Q96DC8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ECHDC3Q96DC8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
ECHDC3Q96DC8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ECHDC3Q96DC8 AC026310.3-201ENST00000625186 2373 ntBASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 AL049796.1-201ENST00000565336 1766 ntBASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 HLA-L-209ENST00000420110 1011 ntBASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 AF201337.1-201ENST00000520239 748 ntBASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 AC104771.1-201ENST00000603335 964 ntBASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.82■□□□□ 0.92
ECHDC3Q96DC8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms