Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATG4AQ8WYN0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATG4AQ8WYN0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.55■■□□□ 1.04
ATG4AQ8WYN0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATG4AQ8WYN0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.55■■□□□ 1.04
ATG4AQ8WYN0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.55■■□□□ 1.04
ATG4AQ8WYN0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATG4AQ8WYN0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ATG4AQ8WYN0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
ATG4AQ8WYN0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATG4AQ8WYN0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.54■■□□□ 1.04
ATG4AQ8WYN0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.54■■□□□ 1.04
ATG4AQ8WYN0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.54■■□□□ 1.04
ATG4AQ8WYN0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATG4AQ8WYN0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.54■■□□□ 1.04
ATG4AQ8WYN0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATG4AQ8WYN0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATG4AQ8WYN0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
ATG4AQ8WYN0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 AC061975.6-201ENST00000579045 1553 ntBASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.53■■□□□ 1.04
ATG4AQ8WYN0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.52■■□□□ 1.04
ATG4AQ8WYN0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATG4AQ8WYN0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
ATG4AQ8WYN0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
ATG4AQ8WYN0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATG4AQ8WYN0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.52■■□□□ 1.04
ATG4AQ8WYN0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATG4AQ8WYN0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATG4AQ8WYN0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.52■■□□□ 1.04
ATG4AQ8WYN0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATG4AQ8WYN0 AC012414.1-201ENST00000556676 535 ntBASIC21.52■■□□□ 1.04
ATG4AQ8WYN0 EEF1DP3-203ENST00000566025 782 ntBASIC21.52■■□□□ 1.04
ATG4AQ8WYN0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.52■■□□□ 1.04
ATG4AQ8WYN0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
ATG4AQ8WYN0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATG4AQ8WYN0 AC007225.1-201ENST00000566331 1836 ntBASIC21.52■■□□□ 1.04
ATG4AQ8WYN0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATG4AQ8WYN0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.52■■□□□ 1.03
ATG4AQ8WYN0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ATG4AQ8WYN0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATG4AQ8WYN0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATG4AQ8WYN0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.51■■□□□ 1.03
ATG4AQ8WYN0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATG4AQ8WYN0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATG4AQ8WYN0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATG4AQ8WYN0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.51■■□□□ 1.03
ATG4AQ8WYN0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATG4AQ8WYN0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.51■■□□□ 1.03
ATG4AQ8WYN0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.51■■□□□ 1.03
ATG4AQ8WYN0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATG4AQ8WYN0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.5■■□□□ 1.03
ATG4AQ8WYN0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
ATG4AQ8WYN0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATG4AQ8WYN0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
ATG4AQ8WYN0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATG4AQ8WYN0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATG4AQ8WYN0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATG4AQ8WYN0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.5■■□□□ 1.03
ATG4AQ8WYN0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ATG4AQ8WYN0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATG4AQ8WYN0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
ATG4AQ8WYN0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATG4AQ8WYN0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
ATG4AQ8WYN0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATG4AQ8WYN0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATG4AQ8WYN0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATG4AQ8WYN0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ATG4AQ8WYN0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.49■■□□□ 1.03
ATG4AQ8WYN0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.49■■□□□ 1.03
ATG4AQ8WYN0 TPRG1LP1-201ENST00000598702 760 ntBASIC21.49■■□□□ 1.03
ATG4AQ8WYN0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATG4AQ8WYN0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms