Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB3IL1Q8TBN0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IL1Q8TBN0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IL1Q8TBN0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IL1Q8TBN0 AC121338.2-201ENST00000622535 1744 ntBASIC20.65■□□□□ 0.9
RAB3IL1Q8TBN0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IL1Q8TBN0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RAB3IL1Q8TBN0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IL1Q8TBN0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IL1Q8TBN0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.65■□□□□ 0.9
RAB3IL1Q8TBN0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB3IL1Q8TBN0 AC010525.1-201ENST00000585559 441 ntBASIC20.65■□□□□ 0.9
RAB3IL1Q8TBN0 AC092171.4-201ENST00000609130 632 ntBASIC20.65■□□□□ 0.9
RAB3IL1Q8TBN0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IL1Q8TBN0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
RAB3IL1Q8TBN0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IL1Q8TBN0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB3IL1Q8TBN0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB3IL1Q8TBN0 AC020907.5-201ENST00000624372 1936 ntBASIC20.65■□□□□ 0.9
RAB3IL1Q8TBN0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
RAB3IL1Q8TBN0 AC027702.1-201ENST00000563810 1770 ntBASIC20.64■□□□□ 0.9
RAB3IL1Q8TBN0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.64■□□□□ 0.9
RAB3IL1Q8TBN0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB3IL1Q8TBN0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB3IL1Q8TBN0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
RAB3IL1Q8TBN0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB3IL1Q8TBN0 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.64■□□□□ 0.89
RAB3IL1Q8TBN0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.64■□□□□ 0.89
RAB3IL1Q8TBN0 AC131212.1-201ENST00000613771 668 ntBASIC20.64■□□□□ 0.89
RAB3IL1Q8TBN0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
RAB3IL1Q8TBN0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.64■□□□□ 0.89
RAB3IL1Q8TBN0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB3IL1Q8TBN0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB3IL1Q8TBN0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.64■□□□□ 0.89
RAB3IL1Q8TBN0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.64■□□□□ 0.89
RAB3IL1Q8TBN0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
RAB3IL1Q8TBN0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB3IL1Q8TBN0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.63■□□□□ 0.89
RAB3IL1Q8TBN0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 AC007225.1-201ENST00000566331 1836 ntBASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 AP005435.1-201ENST00000529293 1178 ntBASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB3IL1Q8TBN0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB3IL1Q8TBN0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms