Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH3Q8TBE1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CNIH3Q8TBE1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH3Q8TBE1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CNIH3Q8TBE1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH3Q8TBE1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CNIH3Q8TBE1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.99■□□□□ 0.63
CNIH3Q8TBE1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CNIH3Q8TBE1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNIH3Q8TBE1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CNIH3Q8TBE1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 AC241377.3-202ENST00000626088 1088 ntBASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 AC241585.3-202ENST00000628937 1088 ntBASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 AC245100.8-202ENST00000629247 1058 ntBASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.98■□□□□ 0.63
CNIH3Q8TBE1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CNIH3Q8TBE1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNIH3Q8TBE1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CNIH3Q8TBE1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNIH3Q8TBE1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNIH3Q8TBE1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNIH3Q8TBE1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.97■□□□□ 0.63
CNIH3Q8TBE1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNIH3Q8TBE1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNIH3Q8TBE1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.97■□□□□ 0.63
CNIH3Q8TBE1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNIH3Q8TBE1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNIH3Q8TBE1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNIH3Q8TBE1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNIH3Q8TBE1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNIH3Q8TBE1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNIH3Q8TBE1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.97■□□□□ 0.63
CNIH3Q8TBE1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 AL117332.1-201ENST00000622628 974 ntBASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 FP700111.2-201ENST00000619190 1892 ntBASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.96■□□□□ 0.63
CNIH3Q8TBE1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.95■□□□□ 0.62
CNIH3Q8TBE1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
CNIH3Q8TBE1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.95■□□□□ 0.62
CNIH3Q8TBE1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CNIH3Q8TBE1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.95■□□□□ 0.62
CNIH3Q8TBE1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.95■□□□□ 0.62
CNIH3Q8TBE1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNIH3Q8TBE1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNIH3Q8TBE1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.95■□□□□ 0.62
CNIH3Q8TBE1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CNIH3Q8TBE1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 AC116562.4-201ENST00000641316 2276 ntBASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNIH3Q8TBE1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms