Protein–RNA interactions for Protein: Q8N9V2

TRIML1, Probable E3 ubiquitin-protein ligase TRIML1, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML1Q8N9V2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
TRIML1Q8N9V2 AC011484.1-201ENST00000377652 1995 ntBASIC23.14■■□□□ 1.3
TRIML1Q8N9V2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.14■■□□□ 1.3
TRIML1Q8N9V2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRIML1Q8N9V2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.14■■□□□ 1.3
TRIML1Q8N9V2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
TRIML1Q8N9V2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIML1Q8N9V2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.14■■□□□ 1.29
TRIML1Q8N9V2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIML1Q8N9V2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.14■■□□□ 1.29
TRIML1Q8N9V2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.14■■□□□ 1.29
TRIML1Q8N9V2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIML1Q8N9V2 TPRG1LP1-201ENST00000598702 760 ntBASIC23.14■■□□□ 1.29
TRIML1Q8N9V2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIML1Q8N9V2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.14■■□□□ 1.29
TRIML1Q8N9V2 AL136967.2-201ENST00000623968 743 ntBASIC23.14■■□□□ 1.29
TRIML1Q8N9V2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
TRIML1Q8N9V2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRIML1Q8N9V2 AC020907.5-201ENST00000624372 1936 ntBASIC23.14■■□□□ 1.29
TRIML1Q8N9V2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.13■■□□□ 1.29
TRIML1Q8N9V2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIML1Q8N9V2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRIML1Q8N9V2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIML1Q8N9V2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIML1Q8N9V2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
TRIML1Q8N9V2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIML1Q8N9V2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRIML1Q8N9V2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIML1Q8N9V2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIML1Q8N9V2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
TRIML1Q8N9V2 AL354811.1-201ENST00000610286 706 ntBASIC23.13■■□□□ 1.29
TRIML1Q8N9V2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIML1Q8N9V2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRIML1Q8N9V2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIML1Q8N9V2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIML1Q8N9V2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIML1Q8N9V2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.12■■□□□ 1.29
TRIML1Q8N9V2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIML1Q8N9V2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIML1Q8N9V2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIML1Q8N9V2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
TRIML1Q8N9V2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.12■■□□□ 1.29
TRIML1Q8N9V2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.12■■□□□ 1.29
TRIML1Q8N9V2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.12■■□□□ 1.29
TRIML1Q8N9V2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.12■■□□□ 1.29
TRIML1Q8N9V2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.12■■□□□ 1.29
TRIML1Q8N9V2 AC061975.6-201ENST00000579045 1553 ntBASIC23.12■■□□□ 1.29
TRIML1Q8N9V2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
TRIML1Q8N9V2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIML1Q8N9V2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
TRIML1Q8N9V2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIML1Q8N9V2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIML1Q8N9V2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
TRIML1Q8N9V2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIML1Q8N9V2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.11■■□□□ 1.29
TRIML1Q8N9V2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
TRIML1Q8N9V2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.11■■□□□ 1.29
TRIML1Q8N9V2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIML1Q8N9V2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
TRIML1Q8N9V2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
TRIML1Q8N9V2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
TRIML1Q8N9V2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRIML1Q8N9V2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.11■■□□□ 1.29
TRIML1Q8N9V2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.1■■□□□ 1.29
TRIML1Q8N9V2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
TRIML1Q8N9V2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
TRIML1Q8N9V2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.1■■□□□ 1.29
TRIML1Q8N9V2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIML1Q8N9V2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIML1Q8N9V2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.1■■□□□ 1.29
TRIML1Q8N9V2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.1■■□□□ 1.29
TRIML1Q8N9V2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.1■■□□□ 1.29
TRIML1Q8N9V2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIML1Q8N9V2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIML1Q8N9V2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIML1Q8N9V2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIML1Q8N9V2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.1■■□□□ 1.29
TRIML1Q8N9V2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.1■■□□□ 1.29
TRIML1Q8N9V2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
TRIML1Q8N9V2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms