Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.68■□□□□ 0.9
TRIM42Q8IWZ5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRIM42Q8IWZ5 AC027702.1-201ENST00000563810 1770 ntBASIC20.67■□□□□ 0.9
TRIM42Q8IWZ5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TRIM42Q8IWZ5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TRIM42Q8IWZ5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM42Q8IWZ5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM42Q8IWZ5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM42Q8IWZ5 AC131281.2-201ENST00000520478 145 ntBASIC20.67■□□□□ 0.9
TRIM42Q8IWZ5 AC092171.4-201ENST00000609130 632 ntBASIC20.67■□□□□ 0.9
TRIM42Q8IWZ5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.67■□□□□ 0.9
TRIM42Q8IWZ5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM42Q8IWZ5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM42Q8IWZ5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM42Q8IWZ5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM42Q8IWZ5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM42Q8IWZ5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.67■□□□□ 0.9
TRIM42Q8IWZ5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM42Q8IWZ5 AC007225.1-201ENST00000566331 1836 ntBASIC20.67■□□□□ 0.9
TRIM42Q8IWZ5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM42Q8IWZ5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM42Q8IWZ5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM42Q8IWZ5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRIM42Q8IWZ5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM42Q8IWZ5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM42Q8IWZ5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
TRIM42Q8IWZ5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM42Q8IWZ5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM42Q8IWZ5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM42Q8IWZ5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
TRIM42Q8IWZ5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM42Q8IWZ5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM42Q8IWZ5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM42Q8IWZ5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM42Q8IWZ5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM42Q8IWZ5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM42Q8IWZ5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 AC010525.1-201ENST00000585559 441 ntBASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM42Q8IWZ5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.64■□□□□ 0.9
TRIM42Q8IWZ5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.64■□□□□ 0.9
TRIM42Q8IWZ5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM42Q8IWZ5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.64■□□□□ 0.9
TRIM42Q8IWZ5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM42Q8IWZ5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM42Q8IWZ5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM42Q8IWZ5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM42Q8IWZ5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TRIM42Q8IWZ5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM42Q8IWZ5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM42Q8IWZ5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
TRIM42Q8IWZ5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRIM42Q8IWZ5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM42Q8IWZ5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM42Q8IWZ5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TRIM42Q8IWZ5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM42Q8IWZ5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM42Q8IWZ5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TRIM42Q8IWZ5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
TRIM42Q8IWZ5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TRIM42Q8IWZ5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms