Protein–RNA interactions for Protein: Q6PDB4

ZNF880, Zinc finger protein 880, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF880Q6PDB4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF880Q6PDB4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF880Q6PDB4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
ZNF880Q6PDB4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
ZNF880Q6PDB4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 AC091305.1-201ENST00000479476 895 ntBASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 AC012414.1-201ENST00000556676 535 ntBASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 AC053503.5-201ENST00000601508 636 ntBASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 AL031432.3-201ENST00000607698 485 ntBASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF880Q6PDB4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 AF213884.3-201ENST00000563833 479 ntBASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 AC110285.6-201ENST00000617652 491 ntBASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ZNF880Q6PDB4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF880Q6PDB4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF880Q6PDB4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF880Q6PDB4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
ZNF880Q6PDB4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF880Q6PDB4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF880Q6PDB4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.35■□□□□ 0.37
ZNF880Q6PDB4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF880Q6PDB4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF880Q6PDB4 AL136967.2-201ENST00000623968 743 ntBASIC17.35■□□□□ 0.37
ZNF880Q6PDB4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.35■□□□□ 0.37
ZNF880Q6PDB4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF880Q6PDB4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF880Q6PDB4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ZNF880Q6PDB4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF880Q6PDB4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF880Q6PDB4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF880Q6PDB4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 TPRG1LP1-201ENST00000598702 760 ntBASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF880Q6PDB4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
ZNF880Q6PDB4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
ZNF880Q6PDB4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.33■□□□□ 0.37
ZNF880Q6PDB4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF880Q6PDB4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
ZNF880Q6PDB4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF880Q6PDB4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF880Q6PDB4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF880Q6PDB4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
ZNF880Q6PDB4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF880Q6PDB4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ZNF880Q6PDB4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF880Q6PDB4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms