Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MIR4497-201ENST00000583208 89 ntBASIC31.82■■■□□ 2.68
CDC42BPAQ5VT25 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC31.82■■■□□ 2.68
CDC42BPAQ5VT25 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC31.82■■■□□ 2.68
CDC42BPAQ5VT25 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CDC42BPAQ5VT25 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
CDC42BPAQ5VT25 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CDC42BPAQ5VT25 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC31.81■■■□□ 2.68
CDC42BPAQ5VT25 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CDC42BPAQ5VT25 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC31.81■■■□□ 2.68
CDC42BPAQ5VT25 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC31.8■■■□□ 2.68
CDC42BPAQ5VT25 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
CDC42BPAQ5VT25 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CDC42BPAQ5VT25 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC31.8■■■□□ 2.68
CDC42BPAQ5VT25 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CDC42BPAQ5VT25 KRT17P3-201ENST00000420566 1262 ntBASIC31.8■■■□□ 2.68
CDC42BPAQ5VT25 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CDC42BPAQ5VT25 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CDC42BPAQ5VT25 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC31.8■■■□□ 2.68
CDC42BPAQ5VT25 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC31.8■■■□□ 2.68
CDC42BPAQ5VT25 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CDC42BPAQ5VT25 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC31.8■■■□□ 2.68
CDC42BPAQ5VT25 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
CDC42BPAQ5VT25 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC31.79■■■□□ 2.68
CDC42BPAQ5VT25 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
CDC42BPAQ5VT25 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC31.79■■■□□ 2.68
CDC42BPAQ5VT25 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC31.79■■■□□ 2.68
CDC42BPAQ5VT25 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC31.79■■■□□ 2.68
CDC42BPAQ5VT25 OR2A1-AS1-207ENST00000486094 819 ntBASIC31.79■■■□□ 2.68
CDC42BPAQ5VT25 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CDC42BPAQ5VT25 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC31.79■■■□□ 2.68
CDC42BPAQ5VT25 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CDC42BPAQ5VT25 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
CDC42BPAQ5VT25 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CDC42BPAQ5VT25 AC012618.2-201ENST00000428058 849 ntBASIC31.78■■■□□ 2.68
CDC42BPAQ5VT25 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CDC42BPAQ5VT25 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC31.78■■■□□ 2.68
CDC42BPAQ5VT25 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC31.78■■■□□ 2.68
CDC42BPAQ5VT25 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC31.78■■■□□ 2.68
CDC42BPAQ5VT25 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
CDC42BPAQ5VT25 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC31.78■■■□□ 2.68
CDC42BPAQ5VT25 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC31.78■■■□□ 2.68
CDC42BPAQ5VT25 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CDC42BPAQ5VT25 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC31.78■■■□□ 2.68
CDC42BPAQ5VT25 KRT18P68-201ENST00000392293 1000 ntBASIC31.78■■■□□ 2.68
CDC42BPAQ5VT25 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
CDC42BPAQ5VT25 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC31.77■■■□□ 2.68
CDC42BPAQ5VT25 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC31.77■■■□□ 2.68
CDC42BPAQ5VT25 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC31.77■■■□□ 2.68
CDC42BPAQ5VT25 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC31.77■■■□□ 2.68
CDC42BPAQ5VT25 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
CDC42BPAQ5VT25 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CDC42BPAQ5VT25 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CDC42BPAQ5VT25 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
CDC42BPAQ5VT25 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
CDC42BPAQ5VT25 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC31.76■■■□□ 2.68
CDC42BPAQ5VT25 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC31.76■■■□□ 2.67
CDC42BPAQ5VT25 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC31.76■■■□□ 2.67
CDC42BPAQ5VT25 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC31.76■■■□□ 2.67
CDC42BPAQ5VT25 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC31.76■■■□□ 2.67
CDC42BPAQ5VT25 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
CDC42BPAQ5VT25 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CDC42BPAQ5VT25 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC31.76■■■□□ 2.67
CDC42BPAQ5VT25 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CDC42BPAQ5VT25 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
CDC42BPAQ5VT25 C1orf229-201ENST00000623686 2258 ntBASIC31.76■■■□□ 2.67
CDC42BPAQ5VT25 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
CDC42BPAQ5VT25 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDC42BPAQ5VT25 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CDC42BPAQ5VT25 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CDC42BPAQ5VT25 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDC42BPAQ5VT25 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC31.75■■■□□ 2.67
CDC42BPAQ5VT25 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CDC42BPAQ5VT25 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDC42BPAQ5VT25 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CDC42BPAQ5VT25 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CDC42BPAQ5VT25 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC31.74■■■□□ 2.67
CDC42BPAQ5VT25 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CDC42BPAQ5VT25 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CDC42BPAQ5VT25 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
CDC42BPAQ5VT25 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CDC42BPAQ5VT25 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC31.74■■■□□ 2.67
CDC42BPAQ5VT25 CRK-204ENST00000574295 1391 ntTSL 5 BASIC31.74■■■□□ 2.67
CDC42BPAQ5VT25 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
CDC42BPAQ5VT25 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC31.74■■■□□ 2.67
CDC42BPAQ5VT25 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CDC42BPAQ5VT25 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CDC42BPAQ5VT25 HES2-205ENST00000487437 968 ntTSL 3 BASIC31.73■■■□□ 2.67
CDC42BPAQ5VT25 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC31.73■■■□□ 2.67
CDC42BPAQ5VT25 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CDC42BPAQ5VT25 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC31.72■■■□□ 2.67
CDC42BPAQ5VT25 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC31.72■■■□□ 2.67
CDC42BPAQ5VT25 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CDC42BPAQ5VT25 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC31.72■■■□□ 2.67
CDC42BPAQ5VT25 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CDC42BPAQ5VT25 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC31.72■■■□□ 2.67
CDC42BPAQ5VT25 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC31.72■■■□□ 2.67
CDC42BPAQ5VT25 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC31.72■■■□□ 2.67
CDC42BPAQ5VT25 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CDC42BPAQ5VT25 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC31.72■■■□□ 2.67
CDC42BPAQ5VT25 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms