Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 FAM220CP-201ENST00000395253 831 ntBASIC11.56□□□□□ -0.56
UBR4Q5T4S7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 FAM86EP-206ENST00000510506 987 ntBASIC11.56□□□□□ -0.56
UBR4Q5T4S7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 CKBP1-201ENST00000565489 1086 ntBASIC11.56□□□□□ -0.56
UBR4Q5T4S7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 ECEL1P2-202ENST00000465689 757 ntBASIC11.56□□□□□ -0.56
UBR4Q5T4S7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 FAM87A-204ENST00000613235 858 ntBASIC11.56□□□□□ -0.56
UBR4Q5T4S7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
UBR4Q5T4S7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 AL390719.1-204ENST00000412397 1219 ntBASIC11.55□□□□□ -0.56
UBR4Q5T4S7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 AC009078.2-202ENST00000463353 338 ntBASIC11.55□□□□□ -0.56
UBR4Q5T4S7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 KRT16P2-201ENST00000414673 1423 ntBASIC11.55□□□□□ -0.56
UBR4Q5T4S7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
UBR4Q5T4S7 AL671277.2-201ENST00000458060 996 ntBASIC11.55□□□□□ -0.56
UBR4Q5T4S7 LINC01238-205ENST00000567549 1107 ntBASIC11.55□□□□□ -0.56
UBR4Q5T4S7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 INGX-201ENST00000359239 846 ntBASIC11.54□□□□□ -0.56
UBR4Q5T4S7 MIR1238-201ENST00000408483 83 ntBASIC11.54□□□□□ -0.56
UBR4Q5T4S7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 AC091390.4-202ENST00000476426 537 ntBASIC11.54□□□□□ -0.56
UBR4Q5T4S7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UBR4Q5T4S7 PCED1CP-201ENST00000419887 785 ntBASIC11.54□□□□□ -0.56
UBR4Q5T4S7 AL390719.2-201ENST00000606993 987 ntBASIC11.54□□□□□ -0.56
UBR4Q5T4S7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC11.53□□□□□ -0.56
UBR4Q5T4S7 AC008622.2-201ENST00000617006 1229 ntBASIC11.53□□□□□ -0.56
UBR4Q5T4S7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms