Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SYPL1Q16563 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYPL1Q16563 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYPL1Q16563 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYPL1Q16563 KRT87P-202ENST00000534226 1464 ntBASIC19.34■□□□□ 0.69
SYPL1Q16563 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYPL1Q16563 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYPL1Q16563 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SYPL1Q16563 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SYPL1Q16563 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYPL1Q16563 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
SYPL1Q16563 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYPL1Q16563 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYPL1Q16563 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYPL1Q16563 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.33■□□□□ 0.68
SYPL1Q16563 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SYPL1Q16563 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.33■□□□□ 0.68
SYPL1Q16563 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYPL1Q16563 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYPL1Q16563 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYPL1Q16563 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.32■□□□□ 0.68
SYPL1Q16563 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYPL1Q16563 SLC25A24-204ENST00000569674 2357 ntBASIC19.32■□□□□ 0.68
SYPL1Q16563 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYPL1Q16563 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SYPL1Q16563 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYPL1Q16563 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYPL1Q16563 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYPL1Q16563 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYPL1Q16563 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.32■□□□□ 0.68
SYPL1Q16563 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYPL1Q16563 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYPL1Q16563 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYPL1Q16563 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYPL1Q16563 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYPL1Q16563 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYPL1Q16563 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SYPL1Q16563 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.31■□□□□ 0.68
SYPL1Q16563 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYPL1Q16563 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.31■□□□□ 0.68
SYPL1Q16563 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYPL1Q16563 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
SYPL1Q16563 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYPL1Q16563 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYPL1Q16563 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYPL1Q16563 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.31■□□□□ 0.68
SYPL1Q16563 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SYPL1Q16563 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.31■□□□□ 0.68
SYPL1Q16563 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.31■□□□□ 0.68
SYPL1Q16563 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYPL1Q16563 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SYPL1Q16563 AC073314.1-201ENST00000568729 2216 ntBASIC19.31■□□□□ 0.68
SYPL1Q16563 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SYPL1Q16563 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYPL1Q16563 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.3■□□□□ 0.68
SYPL1Q16563 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYPL1Q16563 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYPL1Q16563 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SYPL1Q16563 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYPL1Q16563 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SYPL1Q16563 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.3■□□□□ 0.68
SYPL1Q16563 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYPL1Q16563 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYPL1Q16563 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.3■□□□□ 0.68
SYPL1Q16563 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYPL1Q16563 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.3■□□□□ 0.68
SYPL1Q16563 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYPL1Q16563 AC008175.2-201ENST00000612840 297 ntBASIC19.3■□□□□ 0.68
SYPL1Q16563 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SYPL1Q16563 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SYPL1Q16563 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYPL1Q16563 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYPL1Q16563 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYPL1Q16563 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
SYPL1Q16563 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.3■□□□□ 0.68
SYPL1Q16563 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYPL1Q16563 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYPL1Q16563 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYPL1Q16563 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYPL1Q16563 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYPL1Q16563 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYPL1Q16563 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SYPL1Q16563 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.29■□□□□ 0.68
SYPL1Q16563 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SYPL1Q16563 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYPL1Q16563 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.29■□□□□ 0.68
SYPL1Q16563 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.29■□□□□ 0.68
SYPL1Q16563 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.29■□□□□ 0.68
SYPL1Q16563 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.29■□□□□ 0.68
SYPL1Q16563 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.29■□□□□ 0.68
SYPL1Q16563 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.29■□□□□ 0.68
SYPL1Q16563 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SYPL1Q16563 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SYPL1Q16563 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SYPL1Q16563 LINC02228-203ENST00000641970 1355 ntBASIC19.29■□□□□ 0.68
SYPL1Q16563 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.29■□□□□ 0.68
SYPL1Q16563 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYPL1Q16563 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYPL1Q16563 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.28■□□□□ 0.68
SYPL1Q16563 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms