Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB5BP61020 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB5BP61020 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RAB5BP61020 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB5BP61020 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB5BP61020 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RAB5BP61020 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5BP61020 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5BP61020 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5BP61020 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5BP61020 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5BP61020 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB5BP61020 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5BP61020 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5BP61020 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5BP61020 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5BP61020 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5BP61020 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RAB5BP61020 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5BP61020 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5BP61020 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
RAB5BP61020 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB5BP61020 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB5BP61020 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5BP61020 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB5BP61020 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5BP61020 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RAB5BP61020 OR6D1P-202ENST00000641007 5290 ntBASIC16.32■□□□□ 0.2
RAB5BP61020 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5BP61020 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5BP61020 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5BP61020 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RAB5BP61020 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5BP61020 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RAB5BP61020 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB5BP61020 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB5BP61020 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5BP61020 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5BP61020 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5BP61020 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5BP61020 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5BP61020 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5BP61020 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
RAB5BP61020 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB5BP61020 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5BP61020 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5BP61020 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB5BP61020 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5BP61020 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5BP61020 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAB5BP61020 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5BP61020 PKD1P1-201ENST00000458669 6805 ntBASIC16.31■□□□□ 0.2
RAB5BP61020 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
RAB5BP61020 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5BP61020 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB5BP61020 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
RAB5BP61020 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5BP61020 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5BP61020 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB5BP61020 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5BP61020 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RAB5BP61020 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5BP61020 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
RAB5BP61020 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5BP61020 AL049812.1-201ENST00000432563 2267 ntBASIC16.3■□□□□ 0.2
RAB5BP61020 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RAB5BP61020 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5BP61020 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5BP61020 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5BP61020 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5BP61020 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC16.3■□□□□ 0.2
RAB5BP61020 SUZ12P1-203ENST00000578195 985 ntBASIC16.3■□□□□ 0.2
RAB5BP61020 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5BP61020 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5BP61020 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5BP61020 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB5BP61020 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5BP61020 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5BP61020 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5BP61020 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAB5BP61020 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5BP61020 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RAB5BP61020 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB5BP61020 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB5BP61020 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB5BP61020 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5BP61020 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5BP61020 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB5BP61020 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB5BP61020 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB5BP61020 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5BP61020 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB5BP61020 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RAB5BP61020 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5BP61020 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB5BP61020 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5BP61020 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5BP61020 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5BP61020 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5BP61020 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms