Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PAX9P55771 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PAX9P55771 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.68■□□□□ 0.26
PAX9P55771 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.68■□□□□ 0.26
PAX9P55771 SMG8-203ENST00000578922 2178 ntBASIC16.68■□□□□ 0.26
PAX9P55771 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAX9P55771 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PAX9P55771 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.68■□□□□ 0.26
PAX9P55771 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.68■□□□□ 0.26
PAX9P55771 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.68■□□□□ 0.26
PAX9P55771 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PAX9P55771 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PAX9P55771 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PAX9P55771 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAX9P55771 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAX9P55771 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PAX9P55771 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PAX9P55771 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.68■□□□□ 0.26
PAX9P55771 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
PAX9P55771 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.68■□□□□ 0.26
PAX9P55771 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.68■□□□□ 0.26
PAX9P55771 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.68■□□□□ 0.26
PAX9P55771 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.68■□□□□ 0.26
PAX9P55771 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAX9P55771 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAX9P55771 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PAX9P55771 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PAX9P55771 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
PAX9P55771 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PAX9P55771 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
PAX9P55771 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.67■□□□□ 0.26
PAX9P55771 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAX9P55771 AP005435.1-201ENST00000529293 1178 ntBASIC16.67■□□□□ 0.26
PAX9P55771 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAX9P55771 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.67■□□□□ 0.26
PAX9P55771 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PAX9P55771 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAX9P55771 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.67■□□□□ 0.26
PAX9P55771 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PAX9P55771 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PAX9P55771 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAX9P55771 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAX9P55771 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PAX9P55771 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAX9P55771 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAX9P55771 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.66■□□□□ 0.26
PAX9P55771 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PAX9P55771 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAX9P55771 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PAX9P55771 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
PAX9P55771 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.66■□□□□ 0.26
PAX9P55771 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.66■□□□□ 0.26
PAX9P55771 AL020996.1-203ENST00000536896 2307 ntBASIC16.66■□□□□ 0.26
PAX9P55771 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.66■□□□□ 0.26
PAX9P55771 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
PAX9P55771 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAX9P55771 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAX9P55771 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAX9P55771 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.66■□□□□ 0.26
PAX9P55771 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAX9P55771 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.65■□□□□ 0.26
PAX9P55771 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PAX9P55771 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PAX9P55771 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAX9P55771 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PAX9P55771 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PAX9P55771 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PAX9P55771 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAX9P55771 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PAX9P55771 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.65■□□□□ 0.26
PAX9P55771 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PAX9P55771 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAX9P55771 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PAX9P55771 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAX9P55771 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PAX9P55771 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAX9P55771 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.65■□□□□ 0.26
PAX9P55771 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PAX9P55771 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.64■□□□□ 0.25
PAX9P55771 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAX9P55771 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PAX9P55771 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAX9P55771 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PAX9P55771 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.64■□□□□ 0.25
PAX9P55771 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.64■□□□□ 0.25
PAX9P55771 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PAX9P55771 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.64■□□□□ 0.25
PAX9P55771 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.64■□□□□ 0.25
PAX9P55771 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.64■□□□□ 0.25
PAX9P55771 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.64■□□□□ 0.25
PAX9P55771 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAX9P55771 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAX9P55771 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PAX9P55771 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.64■□□□□ 0.25
PAX9P55771 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAX9P55771 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.63■□□□□ 0.25
PAX9P55771 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PAX9P55771 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PAX9P55771 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAX9P55771 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms