Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCNKAP51800 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCNKAP51800 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLCNKAP51800 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.42■□□□□ 0.86
CLCNKAP51800 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLCNKAP51800 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCNKAP51800 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCNKAP51800 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCNKAP51800 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.41■□□□□ 0.86
CLCNKAP51800 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCNKAP51800 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.41■□□□□ 0.86
CLCNKAP51800 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCNKAP51800 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCNKAP51800 AL512625.2-201ENST00000417533 625 ntBASIC20.41■□□□□ 0.86
CLCNKAP51800 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.41■□□□□ 0.86
CLCNKAP51800 AF201337.1-201ENST00000520239 748 ntBASIC20.41■□□□□ 0.86
CLCNKAP51800 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.41■□□□□ 0.86
CLCNKAP51800 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCNKAP51800 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.41■□□□□ 0.86
CLCNKAP51800 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CLCNKAP51800 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCNKAP51800 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.41■□□□□ 0.86
CLCNKAP51800 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.41■□□□□ 0.86
CLCNKAP51800 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLCNKAP51800 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CLCNKAP51800 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCNKAP51800 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCNKAP51800 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.4■□□□□ 0.86
CLCNKAP51800 AC091799.1-201ENST00000422823 811 ntBASIC20.4■□□□□ 0.86
CLCNKAP51800 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLCNKAP51800 TSPY6P-201ENST00000448518 926 ntBASIC20.4■□□□□ 0.86
CLCNKAP51800 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.4■□□□□ 0.86
CLCNKAP51800 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLCNKAP51800 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.4■□□□□ 0.86
CLCNKAP51800 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCNKAP51800 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.4■□□□□ 0.86
CLCNKAP51800 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.4■□□□□ 0.86
CLCNKAP51800 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CLCNKAP51800 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCNKAP51800 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCNKAP51800 Z98882.1-201ENST00000622160 2253 ntBASIC20.39■□□□□ 0.86
CLCNKAP51800 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLCNKAP51800 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.39■□□□□ 0.86
CLCNKAP51800 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.39■□□□□ 0.86
CLCNKAP51800 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLCNKAP51800 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCNKAP51800 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCNKAP51800 GUSBP6-202ENST00000438529 1198 ntBASIC20.39■□□□□ 0.85
CLCNKAP51800 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.39■□□□□ 0.85
CLCNKAP51800 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.39■□□□□ 0.85
CLCNKAP51800 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCNKAP51800 AC069236.1-201ENST00000604339 616 ntBASIC20.39■□□□□ 0.85
CLCNKAP51800 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCNKAP51800 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCNKAP51800 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCNKAP51800 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCNKAP51800 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCNKAP51800 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CLCNKAP51800 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCNKAP51800 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCNKAP51800 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCNKAP51800 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCNKAP51800 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLCNKAP51800 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCNKAP51800 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCNKAP51800 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCNKAP51800 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCNKAP51800 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCNKAP51800 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCNKAP51800 PKD1P6-201ENST00000343738 4769 ntBASIC20.38■□□□□ 0.85
CLCNKAP51800 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCNKAP51800 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCNKAP51800 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CLCNKAP51800 AC142086.2-201ENST00000569753 217 ntBASIC20.38■□□□□ 0.85
CLCNKAP51800 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCNKAP51800 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.38■□□□□ 0.85
CLCNKAP51800 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCNKAP51800 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLCNKAP51800 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCNKAP51800 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCNKAP51800 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCNKAP51800 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CLCNKAP51800 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CLCNKAP51800 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.37■□□□□ 0.85
CLCNKAP51800 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CLCNKAP51800 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCNKAP51800 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCNKAP51800 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CLCNKAP51800 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCNKAP51800 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.37■□□□□ 0.85
CLCNKAP51800 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCNKAP51800 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCNKAP51800 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCNKAP51800 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.37■□□□□ 0.85
CLCNKAP51800 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLCNKAP51800 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLCNKAP51800 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCNKAP51800 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.37■□□□□ 0.85
CLCNKAP51800 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CLCNKAP51800 AC105036.2-201ENST00000569468 176 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms