Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTSKP43235 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.69■□□□□ 0.9
CTSKP43235 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTSKP43235 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTSKP43235 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTSKP43235 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTSKP43235 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTSKP43235 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.68■□□□□ 0.9
CTSKP43235 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTSKP43235 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.68■□□□□ 0.9
CTSKP43235 AC098590.1-201ENST00000468126 897 ntBASIC20.68■□□□□ 0.9
CTSKP43235 RPS2P52-201ENST00000469610 820 ntBASIC20.68■□□□□ 0.9
CTSKP43235 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.68■□□□□ 0.9
CTSKP43235 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.68■□□□□ 0.9
CTSKP43235 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTSKP43235 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.68■□□□□ 0.9
CTSKP43235 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CTSKP43235 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.68■□□□□ 0.9
CTSKP43235 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTSKP43235 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTSKP43235 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.67■□□□□ 0.9
CTSKP43235 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSKP43235 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTSKP43235 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTSKP43235 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.67■□□□□ 0.9
CTSKP43235 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.67■□□□□ 0.9
CTSKP43235 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSKP43235 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTSKP43235 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.67■□□□□ 0.9
CTSKP43235 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.67■□□□□ 0.9
CTSKP43235 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CTSKP43235 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTSKP43235 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSKP43235 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CTSKP43235 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSKP43235 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSKP43235 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSKP43235 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSKP43235 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSKP43235 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CTSKP43235 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTSKP43235 ECEL1P1-201ENST00000373592 1742 ntBASIC20.67■□□□□ 0.9
CTSKP43235 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTSKP43235 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSKP43235 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.66■□□□□ 0.9
CTSKP43235 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSKP43235 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CTSKP43235 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSKP43235 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSKP43235 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CTSKP43235 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
CTSKP43235 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.66■□□□□ 0.9
CTSKP43235 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.66■□□□□ 0.9
CTSKP43235 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.66■□□□□ 0.9
CTSKP43235 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.66■□□□□ 0.9
CTSKP43235 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.66■□□□□ 0.9
CTSKP43235 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTSKP43235 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSKP43235 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSKP43235 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.66■□□□□ 0.9
CTSKP43235 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTSKP43235 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSKP43235 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.66■□□□□ 0.9
CTSKP43235 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSKP43235 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSKP43235 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CTSKP43235 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.66■□□□□ 0.9
CTSKP43235 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTSKP43235 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CTSKP43235 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CTSKP43235 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSKP43235 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTSKP43235 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSKP43235 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTSKP43235 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CTSKP43235 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTSKP43235 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTSKP43235 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTSKP43235 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CTSKP43235 GCSHP5-201ENST00000443090 522 ntBASIC20.65■□□□□ 0.9
CTSKP43235 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.65■□□□□ 0.9
CTSKP43235 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTSKP43235 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.65■□□□□ 0.9
CTSKP43235 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTSKP43235 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTSKP43235 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CTSKP43235 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
CTSKP43235 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.64■□□□□ 0.89
CTSKP43235 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTSKP43235 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CTSKP43235 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTSKP43235 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTSKP43235 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.64■□□□□ 0.89
CTSKP43235 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.64■□□□□ 0.89
CTSKP43235 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.64■□□□□ 0.89
CTSKP43235 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.64■□□□□ 0.89
CTSKP43235 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.64■□□□□ 0.89
CTSKP43235 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CTSKP43235 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.64■□□□□ 0.89
CTSKP43235 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms