Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBP04114 AC087742.1-201ENST00000575880 1738 ntBASIC13.15□□□□□ -0.3
APOBP04114 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
APOBP04114 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
APOBP04114 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBP04114 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
APOBP04114 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
APOBP04114 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
APOBP04114 AC133681.1-201ENST00000465482 601 ntBASIC13.15□□□□□ -0.31
APOBP04114 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC13.14□□□□□ -0.31
APOBP04114 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOBP04114 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
APOBP04114 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOBP04114 AC113410.3-201ENST00000623366 203 ntBASIC13.14□□□□□ -0.31
APOBP04114 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.14□□□□□ -0.31
APOBP04114 AC087633.2-202ENST00000565166 1439 ntBASIC13.14□□□□□ -0.31
APOBP04114 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOBP04114 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOBP04114 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.14□□□□□ -0.31
APOBP04114 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.14□□□□□ -0.31
APOBP04114 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.14□□□□□ -0.31
APOBP04114 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC13.14□□□□□ -0.31
APOBP04114 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOBP04114 AC091799.1-201ENST00000422823 811 ntBASIC13.14□□□□□ -0.31
APOBP04114 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
APOBP04114 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.14□□□□□ -0.31
APOBP04114 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.14□□□□□ -0.31
APOBP04114 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
APOBP04114 AC120498.10-201ENST00000621827 505 ntBASIC13.14□□□□□ -0.31
APOBP04114 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOBP04114 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
APOBP04114 AC003102.1-202ENST00000563394 1796 ntBASIC13.14□□□□□ -0.31
APOBP04114 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
APOBP04114 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOBP04114 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.13□□□□□ -0.31
APOBP04114 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOBP04114 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOBP04114 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOBP04114 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOBP04114 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOBP04114 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.13□□□□□ -0.31
APOBP04114 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.13□□□□□ -0.31
APOBP04114 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
APOBP04114 NFE2L3P1-201ENST00000588207 1959 ntBASIC13.13□□□□□ -0.31
APOBP04114 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOBP04114 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.13□□□□□ -0.31
APOBP04114 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.13□□□□□ -0.31
APOBP04114 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
APOBP04114 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
APOBP04114 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
APOBP04114 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOBP04114 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
APOBP04114 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOBP04114 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
APOBP04114 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
APOBP04114 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOBP04114 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOBP04114 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOBP04114 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.12□□□□□ -0.31
APOBP04114 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOBP04114 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOBP04114 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.12□□□□□ -0.31
APOBP04114 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.12□□□□□ -0.31
APOBP04114 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.12□□□□□ -0.31
APOBP04114 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.12□□□□□ -0.31
APOBP04114 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOBP04114 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC13.12□□□□□ -0.31
APOBP04114 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
APOBP04114 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
APOBP04114 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.12□□□□□ -0.31
APOBP04114 AL121894.2-201ENST00000602977 491 ntBASIC13.12□□□□□ -0.31
APOBP04114 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
APOBP04114 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.11□□□□□ -0.31
APOBP04114 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC13.11□□□□□ -0.31
APOBP04114 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.11□□□□□ -0.31
APOBP04114 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.11□□□□□ -0.31
APOBP04114 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOBP04114 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOBP04114 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOBP04114 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.11□□□□□ -0.31
APOBP04114 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.11□□□□□ -0.31
APOBP04114 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.11□□□□□ -0.31
APOBP04114 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOBP04114 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOBP04114 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC13.11□□□□□ -0.31
APOBP04114 GCA-201ENST00000233612 1694 ntTSL 2 BASIC13.11□□□□□ -0.31
APOBP04114 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOBP04114 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
APOBP04114 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOBP04114 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC13.11□□□□□ -0.31
APOBP04114 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOBP04114 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOBP04114 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOBP04114 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.11□□□□□ -0.31
APOBP04114 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.11□□□□□ -0.31
APOBP04114 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
APOBP04114 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.11□□□□□ -0.31
APOBP04114 CREM-210ENST00000374721 2020 ntTSL 5 BASIC13.11□□□□□ -0.31
APOBP04114 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOBP04114 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms