Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
PTCD1O75127 MME-217ENST00000616757 1315 ntTSL 5 BASIC26.82■■□□□ 1.88
PTCD1O75127 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PTCD1O75127 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PTCD1O75127 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC26.81■■□□□ 1.88
PTCD1O75127 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PTCD1O75127 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PTCD1O75127 AC092368.3-202ENST00000574180 1591 ntBASIC26.81■■□□□ 1.88
PTCD1O75127 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
PTCD1O75127 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PTCD1O75127 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
PTCD1O75127 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PTCD1O75127 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC26.81■■□□□ 1.88
PTCD1O75127 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC26.81■■□□□ 1.88
PTCD1O75127 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
PTCD1O75127 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PTCD1O75127 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
PTCD1O75127 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC26.81■■□□□ 1.88
PTCD1O75127 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC26.81■■□□□ 1.88
PTCD1O75127 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PTCD1O75127 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
PTCD1O75127 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PTCD1O75127 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
PTCD1O75127 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.8■■□□□ 1.88
PTCD1O75127 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PTCD1O75127 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC26.8■■□□□ 1.88
PTCD1O75127 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PTCD1O75127 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PTCD1O75127 MFF-205ENST00000354503 1085 ntTSL 2 BASIC26.8■■□□□ 1.88
PTCD1O75127 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC26.8■■□□□ 1.88
PTCD1O75127 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.8■■□□□ 1.88
PTCD1O75127 AC007322.3-201ENST00000426526 701 ntBASIC26.8■■□□□ 1.88
PTCD1O75127 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC26.8■■□□□ 1.88
PTCD1O75127 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC26.8■■□□□ 1.88
PTCD1O75127 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.8■■□□□ 1.88
PTCD1O75127 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC26.8■■□□□ 1.88
PTCD1O75127 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.8■■□□□ 1.88
PTCD1O75127 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC26.8■■□□□ 1.88
PTCD1O75127 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC26.8■■□□□ 1.88
PTCD1O75127 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PTCD1O75127 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
PTCD1O75127 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PTCD1O75127 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PTCD1O75127 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PTCD1O75127 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
PTCD1O75127 UBE2SP1-201ENST00000450587 669 ntBASIC26.79■■□□□ 1.88
PTCD1O75127 AC233263.1-201ENST00000578059 224 ntBASIC26.79■■□□□ 1.88
PTCD1O75127 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
PTCD1O75127 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC26.79■■□□□ 1.88
PTCD1O75127 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PTCD1O75127 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
PTCD1O75127 TERT-206ENST00000508104 2486 ntTSL 5 BASIC26.78■■□□□ 1.88
PTCD1O75127 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PTCD1O75127 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
PTCD1O75127 SAPCD2P1-201ENST00000395413 1184 ntBASIC26.78■■□□□ 1.88
PTCD1O75127 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC26.78■■□□□ 1.88
PTCD1O75127 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PTCD1O75127 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC26.78■■□□□ 1.88
PTCD1O75127 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PTCD1O75127 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PTCD1O75127 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
PTCD1O75127 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PTCD1O75127 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC26.77■■□□□ 1.88
PTCD1O75127 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PTCD1O75127 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PTCD1O75127 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PTCD1O75127 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PTCD1O75127 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PTCD1O75127 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
PTCD1O75127 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PTCD1O75127 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PTCD1O75127 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PTCD1O75127 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
PTCD1O75127 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.77■■□□□ 1.88
PTCD1O75127 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
PTCD1O75127 RPPH1-201ENST00000516869 333 ntBASIC26.77■■□□□ 1.88
PTCD1O75127 C1QBPP2-201ENST00000528754 825 ntBASIC26.77■■□□□ 1.88
PTCD1O75127 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PTCD1O75127 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PTCD1O75127 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC26.77■■□□□ 1.88
PTCD1O75127 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC26.77■■□□□ 1.88
PTCD1O75127 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
PTCD1O75127 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PTCD1O75127 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.88
PTCD1O75127 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PTCD1O75127 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.76■■□□□ 1.87
PTCD1O75127 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC26.76■■□□□ 1.87
PTCD1O75127 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PTCD1O75127 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC26.76■■□□□ 1.87
PTCD1O75127 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC26.76■■□□□ 1.87
PTCD1O75127 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC26.76■■□□□ 1.87
PTCD1O75127 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC26.76■■□□□ 1.87
PTCD1O75127 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC26.76■■□□□ 1.87
PTCD1O75127 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PTCD1O75127 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PTCD1O75127 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PTCD1O75127 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.75■■□□□ 1.87
PTCD1O75127 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.75■■□□□ 1.87
PTCD1O75127 CYP21A1P-202ENST00000354927 1481 ntBASIC26.75■■□□□ 1.87
PTCD1O75127 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC26.75■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms