Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN2BO60939 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCN2BO60939 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SCN2BO60939 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN2BO60939 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN2BO60939 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SCN2BO60939 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SCN2BO60939 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN2BO60939 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SCN2BO60939 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.71■□□□□ 0.75
SCN2BO60939 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCN2BO60939 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.71■□□□□ 0.75
SCN2BO60939 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN2BO60939 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN2BO60939 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN2BO60939 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SCN2BO60939 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SCN2BO60939 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SCN2BO60939 GABARAPL3-202ENST00000624044 1851 ntBASIC19.71■□□□□ 0.75
SCN2BO60939 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCN2BO60939 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN2BO60939 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.7■□□□□ 0.74
SCN2BO60939 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN2BO60939 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.7■□□□□ 0.74
SCN2BO60939 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN2BO60939 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.7■□□□□ 0.74
SCN2BO60939 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN2BO60939 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN2BO60939 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN2BO60939 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN2BO60939 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.7■□□□□ 0.74
SCN2BO60939 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN2BO60939 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.69■□□□□ 0.74
SCN2BO60939 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN2BO60939 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.69■□□□□ 0.74
SCN2BO60939 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SCN2BO60939 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SCN2BO60939 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.69■□□□□ 0.74
SCN2BO60939 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.69■□□□□ 0.74
SCN2BO60939 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.69■□□□□ 0.74
SCN2BO60939 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SCN2BO60939 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.69■□□□□ 0.74
SCN2BO60939 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.69■□□□□ 0.74
SCN2BO60939 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SCN2BO60939 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCN2BO60939 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN2BO60939 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCN2BO60939 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN2BO60939 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN2BO60939 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN2BO60939 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCN2BO60939 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCN2BO60939 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCN2BO60939 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.68■□□□□ 0.74
SCN2BO60939 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN2BO60939 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.68■□□□□ 0.74
SCN2BO60939 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.68■□□□□ 0.74
SCN2BO60939 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.68■□□□□ 0.74
SCN2BO60939 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.68■□□□□ 0.74
SCN2BO60939 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SCN2BO60939 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN2BO60939 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN2BO60939 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN2BO60939 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN2BO60939 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN2BO60939 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN2BO60939 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SCN2BO60939 AC061975.6-201ENST00000579045 1553 ntBASIC19.67■□□□□ 0.74
SCN2BO60939 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN2BO60939 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN2BO60939 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN2BO60939 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN2BO60939 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN2BO60939 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.67■□□□□ 0.74
SCN2BO60939 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.67■□□□□ 0.74
SCN2BO60939 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.67■□□□□ 0.74
SCN2BO60939 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN2BO60939 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.67■□□□□ 0.74
SCN2BO60939 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN2BO60939 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN2BO60939 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN2BO60939 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN2BO60939 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN2BO60939 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.66■□□□□ 0.74
SCN2BO60939 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN2BO60939 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN2BO60939 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN2BO60939 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.66■□□□□ 0.74
SCN2BO60939 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN2BO60939 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN2BO60939 AL354811.1-201ENST00000610286 706 ntBASIC19.66■□□□□ 0.74
SCN2BO60939 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN2BO60939 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN2BO60939 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN2BO60939 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN2BO60939 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN2BO60939 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SCN2BO60939 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.66■□□□□ 0.74
SCN2BO60939 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN2BO60939 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms