Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC29.35■■■□□ 2.29
CHD2O14647 C11orf96-202ENST00000528572 1834 ntBASIC29.35■■■□□ 2.29
CHD2O14647 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC29.35■■■□□ 2.29
CHD2O14647 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC29.35■■■□□ 2.29
CHD2O14647 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC29.35■■■□□ 2.29
CHD2O14647 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CHD2O14647 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CHD2O14647 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
CHD2O14647 PTPA-214ENST00000423100 988 ntTSL 2 BASIC29.34■■■□□ 2.29
CHD2O14647 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
CHD2O14647 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CHD2O14647 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC29.34■■■□□ 2.29
CHD2O14647 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CHD2O14647 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC29.34■■■□□ 2.29
CHD2O14647 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CHD2O14647 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CHD2O14647 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC29.34■■■□□ 2.29
CHD2O14647 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC29.34■■■□□ 2.29
CHD2O14647 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC29.34■■■□□ 2.29
CHD2O14647 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC29.34■■■□□ 2.29
CHD2O14647 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CHD2O14647 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CHD2O14647 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CHD2O14647 PENK-204ENST00000518770 863 ntTSL 2 BASIC29.33■■■□□ 2.29
CHD2O14647 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CHD2O14647 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CHD2O14647 GCA-201ENST00000233612 1694 ntTSL 2 BASIC29.32■■■□□ 2.28
CHD2O14647 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC29.32■■■□□ 2.28
CHD2O14647 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC29.32■■■□□ 2.28
CHD2O14647 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CHD2O14647 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CHD2O14647 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC29.31■■■□□ 2.28
CHD2O14647 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CHD2O14647 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC29.31■■■□□ 2.28
CHD2O14647 NFE2L3P1-201ENST00000588207 1959 ntBASIC29.31■■■□□ 2.28
CHD2O14647 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC29.31■■■□□ 2.28
CHD2O14647 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CHD2O14647 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
CHD2O14647 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CHD2O14647 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CHD2O14647 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
CHD2O14647 TK2-204ENST00000525974 1178 ntTSL 2 BASIC29.3■■■□□ 2.28
CHD2O14647 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC29.3■■■□□ 2.28
CHD2O14647 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CHD2O14647 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CHD2O14647 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CHD2O14647 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CHD2O14647 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC29.29■■■□□ 2.28
CHD2O14647 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC29.29■■■□□ 2.28
CHD2O14647 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC29.29■■■□□ 2.28
CHD2O14647 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
CHD2O14647 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
CHD2O14647 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC29.29■■■□□ 2.28
CHD2O14647 AL023875.1-201ENST00000640777 796 ntBASIC29.29■■■□□ 2.28
CHD2O14647 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC29.29■■■□□ 2.28
CHD2O14647 AC087633.2-202ENST00000565166 1439 ntBASIC29.29■■■□□ 2.28
CHD2O14647 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CHD2O14647 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CHD2O14647 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CHD2O14647 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
CHD2O14647 KRT18P35-201ENST00000510488 1269 ntBASIC29.28■■■□□ 2.28
CHD2O14647 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC29.28■■■□□ 2.28
CHD2O14647 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
CHD2O14647 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
CHD2O14647 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CHD2O14647 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
CHD2O14647 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CHD2O14647 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC29.28■■■□□ 2.28
CHD2O14647 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC29.28■■■□□ 2.28
CHD2O14647 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CHD2O14647 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHD2O14647 AL135905.2-201ENST00000584934 1404 ntBASIC29.27■■■□□ 2.28
CHD2O14647 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHD2O14647 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHD2O14647 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC29.27■■■□□ 2.28
CHD2O14647 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC29.27■■■□□ 2.28
CHD2O14647 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHD2O14647 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC29.27■■■□□ 2.28
CHD2O14647 RARRES2P10-201ENST00000564312 460 ntBASIC29.27■■■□□ 2.28
CHD2O14647 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC29.27■■■□□ 2.28
CHD2O14647 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC29.27■■■□□ 2.28
CHD2O14647 NXN-202ENST00000537628 1340 ntTSL 3 BASIC29.27■■■□□ 2.28
CHD2O14647 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHD2O14647 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHD2O14647 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHD2O14647 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CHD2O14647 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC29.26■■■□□ 2.28
CHD2O14647 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
CHD2O14647 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.28
CHD2O14647 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CHD2O14647 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
CHD2O14647 KRASP1-201ENST00000407852 552 ntBASIC29.26■■■□□ 2.27
CHD2O14647 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
CHD2O14647 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC29.26■■■□□ 2.27
CHD2O14647 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC29.25■■■□□ 2.27
CHD2O14647 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CHD2O14647 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHD2O14647 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC29.25■■■□□ 2.27
CHD2O14647 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CHD2O14647 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC29.25■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms