Protein–RNA interactions for Protein: D6R901

USP17L21, Ubiquitin carboxyl-terminal hydrolase 17-like protein 21, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L21D6R901 Z98882.1-201ENST00000622160 2253 ntBASIC24.68■■□□□ 1.54
USP17L21D6R901 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
USP17L21D6R901 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC24.68■■□□□ 1.54
USP17L21D6R901 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
USP17L21D6R901 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
USP17L21D6R901 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
USP17L21D6R901 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
USP17L21D6R901 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
USP17L21D6R901 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
USP17L21D6R901 PTPA-214ENST00000423100 988 ntTSL 2 BASIC24.67■■□□□ 1.54
USP17L21D6R901 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.67■■□□□ 1.54
USP17L21D6R901 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC24.67■■□□□ 1.54
USP17L21D6R901 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.67■■□□□ 1.54
USP17L21D6R901 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
USP17L21D6R901 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.67■■□□□ 1.54
USP17L21D6R901 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.67■■□□□ 1.54
USP17L21D6R901 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
USP17L21D6R901 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
USP17L21D6R901 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
USP17L21D6R901 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
USP17L21D6R901 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
USP17L21D6R901 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.66■■□□□ 1.54
USP17L21D6R901 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
USP17L21D6R901 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
USP17L21D6R901 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
USP17L21D6R901 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
USP17L21D6R901 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
USP17L21D6R901 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
USP17L21D6R901 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
USP17L21D6R901 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
USP17L21D6R901 CDV3P1-201ENST00000471403 739 ntBASIC24.66■■□□□ 1.54
USP17L21D6R901 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC24.66■■□□□ 1.54
USP17L21D6R901 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.66■■□□□ 1.54
USP17L21D6R901 FAM21FP-204ENST00000608637 956 ntBASIC24.66■■□□□ 1.54
USP17L21D6R901 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
USP17L21D6R901 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC24.66■■□□□ 1.54
USP17L21D6R901 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
USP17L21D6R901 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
USP17L21D6R901 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.66■■□□□ 1.54
USP17L21D6R901 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
USP17L21D6R901 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
USP17L21D6R901 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.65■■□□□ 1.54
USP17L21D6R901 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
USP17L21D6R901 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
USP17L21D6R901 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
USP17L21D6R901 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
USP17L21D6R901 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.65■■□□□ 1.54
USP17L21D6R901 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.65■■□□□ 1.54
USP17L21D6R901 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
USP17L21D6R901 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.65■■□□□ 1.54
USP17L21D6R901 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
USP17L21D6R901 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.65■■□□□ 1.54
USP17L21D6R901 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
USP17L21D6R901 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
USP17L21D6R901 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
USP17L21D6R901 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
USP17L21D6R901 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.64■■□□□ 1.54
USP17L21D6R901 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
USP17L21D6R901 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
USP17L21D6R901 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.64■■□□□ 1.54
USP17L21D6R901 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
USP17L21D6R901 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
USP17L21D6R901 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
USP17L21D6R901 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC24.64■■□□□ 1.54
USP17L21D6R901 BX276092.2-201ENST00000417668 665 ntBASIC24.64■■□□□ 1.54
USP17L21D6R901 AC069152.1-201ENST00000438030 544 ntBASIC24.64■■□□□ 1.54
USP17L21D6R901 VMO1-204ENST00000441199 741 ntTSL 2 BASIC24.64■■□□□ 1.54
USP17L21D6R901 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC24.64■■□□□ 1.54
USP17L21D6R901 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC24.64■■□□□ 1.54
USP17L21D6R901 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.64■■□□□ 1.54
USP17L21D6R901 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC24.64■■□□□ 1.54
USP17L21D6R901 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC24.64■■□□□ 1.53
USP17L21D6R901 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
USP17L21D6R901 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
USP17L21D6R901 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
USP17L21D6R901 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.64■■□□□ 1.53
USP17L21D6R901 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
USP17L21D6R901 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
USP17L21D6R901 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.63■■□□□ 1.53
USP17L21D6R901 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
USP17L21D6R901 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
USP17L21D6R901 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
USP17L21D6R901 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.63■■□□□ 1.53
USP17L21D6R901 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.63■■□□□ 1.53
USP17L21D6R901 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
USP17L21D6R901 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.63■■□□□ 1.53
USP17L21D6R901 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.63■■□□□ 1.53
USP17L21D6R901 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
USP17L21D6R901 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
USP17L21D6R901 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
USP17L21D6R901 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC24.62■■□□□ 1.53
USP17L21D6R901 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.62■■□□□ 1.53
USP17L21D6R901 LINC00565-201ENST00000562710 2331 ntBASIC24.62■■□□□ 1.53
USP17L21D6R901 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.62■■□□□ 1.53
USP17L21D6R901 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
USP17L21D6R901 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
USP17L21D6R901 AC073210.2-201ENST00000430369 194 ntBASIC24.62■■□□□ 1.53
USP17L21D6R901 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC24.62■■□□□ 1.53
USP17L21D6R901 MIR4758-201ENST00000577688 71 ntBASIC24.62■■□□□ 1.53
USP17L21D6R901 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms