Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM9A6NGZ8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM9A6NGZ8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM9A6NGZ8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SMIM9A6NGZ8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.05■□□□□ 0
SMIM9A6NGZ8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.05■□□□□ 0
SMIM9A6NGZ8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SMIM9A6NGZ8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
SMIM9A6NGZ8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SMIM9A6NGZ8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
SMIM9A6NGZ8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SMIM9A6NGZ8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.05■□□□□ 0
SMIM9A6NGZ8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SMIM9A6NGZ8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SMIM9A6NGZ8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
SMIM9A6NGZ8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SMIM9A6NGZ8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC15.05■□□□□ 0
SMIM9A6NGZ8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.05■□□□□ -0
SMIM9A6NGZ8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.05■□□□□ -0
SMIM9A6NGZ8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.05■□□□□ -0
SMIM9A6NGZ8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.05■□□□□ -0
SMIM9A6NGZ8 AC007322.4-201ENST00000509611 723 ntBASIC15.05■□□□□ -0
SMIM9A6NGZ8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.05■□□□□ -0
SMIM9A6NGZ8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.05■□□□□ -0
SMIM9A6NGZ8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.05■□□□□ -0
SMIM9A6NGZ8 AL162412.1-201ENST00000567129 965 ntBASIC15.05■□□□□ -0
SMIM9A6NGZ8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SMIM9A6NGZ8 RBM17P2-201ENST00000616397 1405 ntBASIC15.05■□□□□ -0
SMIM9A6NGZ8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.05■□□□□ -0
SMIM9A6NGZ8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.05■□□□□ -0
SMIM9A6NGZ8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SMIM9A6NGZ8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.05■□□□□ -0
SMIM9A6NGZ8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SMIM9A6NGZ8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.05■□□□□ -0
SMIM9A6NGZ8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.05■□□□□ -0
SMIM9A6NGZ8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SMIM9A6NGZ8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM9A6NGZ8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.04■□□□□ -0
SMIM9A6NGZ8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SMIM9A6NGZ8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.04■□□□□ -0
SMIM9A6NGZ8 Z98882.1-201ENST00000622160 2253 ntBASIC15.04■□□□□ -0
SMIM9A6NGZ8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.04■□□□□ -0
SMIM9A6NGZ8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM9A6NGZ8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.04■□□□□ -0
SMIM9A6NGZ8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM9A6NGZ8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM9A6NGZ8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SMIM9A6NGZ8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM9A6NGZ8 AC007322.1-201ENST00000426983 750 ntBASIC15.04■□□□□ -0
SMIM9A6NGZ8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.04■□□□□ -0
SMIM9A6NGZ8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.04■□□□□ -0
SMIM9A6NGZ8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.04■□□□□ -0
SMIM9A6NGZ8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.04■□□□□ -0
SMIM9A6NGZ8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SMIM9A6NGZ8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.04■□□□□ -0
SMIM9A6NGZ8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC15.04■□□□□ -0
SMIM9A6NGZ8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
SMIM9A6NGZ8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
SMIM9A6NGZ8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.04■□□□□ -0
SMIM9A6NGZ8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMIM9A6NGZ8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.04■□□□□ -0
SMIM9A6NGZ8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM9A6NGZ8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMIM9A6NGZ8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM9A6NGZ8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SMIM9A6NGZ8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM9A6NGZ8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMIM9A6NGZ8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMIM9A6NGZ8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM9A6NGZ8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.03■□□□□ -0
SMIM9A6NGZ8 CDV3P1-201ENST00000471403 739 ntBASIC15.03■□□□□ -0
SMIM9A6NGZ8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.03■□□□□ -0
SMIM9A6NGZ8 DUX4L16-201ENST00000555130 1264 ntBASIC15.03■□□□□ -0
SMIM9A6NGZ8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SMIM9A6NGZ8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC15.03■□□□□ -0
SMIM9A6NGZ8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SMIM9A6NGZ8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM9A6NGZ8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.02■□□□□ -0
SMIM9A6NGZ8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.02■□□□□ -0
SMIM9A6NGZ8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SMIM9A6NGZ8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM9A6NGZ8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM9A6NGZ8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.02■□□□□ -0
SMIM9A6NGZ8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM9A6NGZ8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM9A6NGZ8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SMIM9A6NGZ8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15.02■□□□□ -0
SMIM9A6NGZ8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.02■□□□□ -0
SMIM9A6NGZ8 AC026185.1-201ENST00000445748 174 ntBASIC15.02■□□□□ -0
SMIM9A6NGZ8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.02■□□□□ -0
SMIM9A6NGZ8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.02■□□□□ -0
SMIM9A6NGZ8 AL591742.1-201ENST00000604433 565 ntBASIC15.02■□□□□ -0
SMIM9A6NGZ8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.02■□□□□ -0
SMIM9A6NGZ8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.02■□□□□ -0
SMIM9A6NGZ8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM9A6NGZ8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM9A6NGZ8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM9A6NGZ8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SMIM9A6NGZ8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
SMIM9A6NGZ8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms